HHsearch alignment for GI: 254780623 and conserved domain: cd05063
>cd05063 PTKc_EphR_A2 Catalytic Domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.92 E-value=9.2e-09 Score=87.06 Aligned_cols=143 Identities=15% Similarity=0.210 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHEEC-CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7666778888655550212-888723687640310468877778899987532114685433469179999999887888
Q gi|254780623|r 124 DDPIAAASIAQVHPAVVHD-INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKME 202 (517)
Q Consensus 124 dePlasASiaQVh~A~l~d-~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 202 (517)
T Consensus 10 ~~~iG~G~fG~Vykg~~~~~g~~~~~vavK~l~~~~~~~~---------------------------------------~ 50 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ---------------------------------------R 50 (268)
T ss_pred EEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHH---------------------------------------H
T ss_conf 1698327883999999988997668999999476779899---------------------------------------9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC---CCEEEEECCCCCCCCHHHHHHHHCCCHHH---HHHHHHHHHHH
Q ss_conf 6559999889872024467766430000102217---83353002478632426773320022568---99999999999
Q gi|254780623|r 203 MDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE---RDVITMEWIDGVKISDTEKLRACGHDLER---LSVTLVQSFLL 276 (517)
Q Consensus 203 lD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st---~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---la~~l~~~~~~ 276 (517)
T Consensus 51 ~~f~~E~~~l~~l~H-----~nIv--~~~g-~~~~~~~~~iv~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~ia~-gL~ 121 (268)
T cd05063 51 QDFLSEASIMGQFSH-----HNII--RLEG-VVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAA-GMK 121 (268)
T ss_pred HHHHHHHHHHHHCCC-----CCCC--CEEE-EEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH-HHH
T ss_conf 999999999986689-----7897--3507-998899889999828989799976402789999999999999999-999
Q ss_pred HHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 89744866178786228980289535743403121698
Q gi|254780623|r 277 HTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 277 qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 122 yLH~~~iiHrDlK~~NILld~~~~~Kl~DFGls~~~~~ 159 (268)
T cd05063 122 YLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHCCEECCCCCCCEEEECCCCCEEECCCCCCEECCC
T ss_conf 98329987553475507888999889823765547756