HHsearch alignment for GI: 254780623 and conserved domain: cd05066
>cd05066 PTKc_EphR_A Catalytic Domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.71 E-value=8.3e-08 Score=79.67 Aligned_cols=146 Identities=15% Similarity=0.219 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHEECCC-CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6766677888865555021288-872368764031046887777889998753211468543346917999999988788
Q gi|254780623|r 123 FDDPIAAASIAQVHPAVVHDIN-GYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKM 201 (517)
Q Consensus 123 fdePlasASiaQVh~A~l~d~~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 201 (517)
T Consensus 8 i~~~iG~G~fG~Vy~~~~~~~~~~~~~VAiK~l~~~~~~~---------------------------------------~ 48 (267)
T cd05066 8 IERVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK---------------------------------------Q 48 (267)
T ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHH---------------------------------------H
T ss_conf 8369941789599999997799767999999978666979---------------------------------------9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCC-CCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHH---HHHHHHHHHHHH
Q ss_conf 865599998898720244677664-3000010221783353002478632426773320022568---999999999998
Q gi|254780623|r 202 EMDLRLEAAAFSEMAENTVKDQGF-RVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLER---LSVTLVQSFLLH 277 (517)
Q Consensus 202 ElD~~~Ea~n~~~~~~~~~~~~~v-~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---la~~l~~~~~~q 277 (517)
T Consensus 49 ~~~f~~E~~il~~l~H-----pnIv~l~g~~~-~~~~~~lv~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~ia~g-l~y 121 (267)
T cd05066 49 RRDFLGEASIMGQFDH-----PNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASG-MKY 121 (267)
T ss_pred HHHHHHHHHHHHHCCC-----CCEEEEEEEEC-CCCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHH
T ss_conf 9999999999986899-----88824999984-4998999998379997899997368999999999999999999-999
Q ss_pred HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 9744866178786228980289535743403121698
Q gi|254780623|r 278 TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 278 i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 122 Lh~~~iiHRDlK~~NiLl~~~~~~Ki~DFGls~~~~~ 158 (267)
T cd05066 122 LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHCCEECCCCCCCEEEECCCCCEEECCCCCCEECCC
T ss_conf 9669855466762548988999889854766568778