HHsearch alignment for GI: 254780623 and conserved domain: cd05071
>cd05071 PTKc_Src Catalytic Domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.35 E-value=8.3e-07 Score=71.92 Aligned_cols=142 Identities=15% Similarity=0.192 Sum_probs=90.7
Q ss_pred HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r 120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ 197 (517)
Q Consensus 120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 197 (517)
T Consensus 5 ~e~~~~~~~iG~G~fg~Vy~g~~~~---~~~VAiK~~~~~~~~---------------------------~----~---- 46 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGTMS---------------------------P----E---- 46 (262)
T ss_pred HHHEEEEEEEEECCCCEEEEEEECC---CCEEEEEEECCCCCC---------------------------H----H----
T ss_conf 7997976899407683999999999---999999998736799---------------------------8----9----
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC--CCEEEEECCCCCCCCHHHHHHHHC-CC---HHHHHHHHH
Q ss_conf 878886559999889872024467766430000102217--833530024786324267733200-22---568999999
Q gi|254780623|r 198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE--RDVITMEWIDGVKISDTEKLRACG-HD---LERLSVTLV 271 (517)
Q Consensus 198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st--~~VLvmE~i~G~~i~d~~~l~~~~-~d---~~~la~~l~ 271 (517)
T Consensus 47 ------~~~~Ei~~l~~l~H-----~nI--v~~~g-~~~~~~~~iv~Ey~~~G~L~~~l~~~~~~~~~~~~~~~i~~~ia 112 (262)
T cd05071 47 ------AFLQEAQVMKKLRH-----EKL--VQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 112 (262)
T ss_pred ------HHHHHHHHHHHCCC-----CCE--EEEEE-EEECCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf ------99999999986899-----897--66999-99269649999817999899998545587899999999999999
Q ss_pred HHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 9999989744866178786228980289535743403121698
Q gi|254780623|r 272 QSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 272 ~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 113 ~g-l~yLH~~~iiHrDLK~~NILl~~~~~~Kl~DFGls~~~~~ 154 (262)
T cd05071 113 SG-MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred HH-HHHHHHCCEEECEECCCCEEECCCCEEEECCCCCCEECCC
T ss_conf 99-9998648887246051517887998299812787648778