>cd05085 PTKc_Fer Catalytic Domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

Probab=98.86 E-value=1.3e-08 Score=85.92 Aligned_cols=138 Identities=16% Similarity=0.192 Sum_probs=87.0 Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559 Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517) Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517) T Consensus 3 iG~G~fg~Vy~g~~~~---~~~VAvK~~~~~~~~~~~---------------------------------------~~f~ 40 (250) T cd05085 3 LGKGNFGEVFKGTLKD---KTPVAVKTCKEDLPQELK---------------------------------------IKFL 40 (250) T ss_pred EEECCCCEEEEEEECC---CCEEEEEEECCCCCHHHH---------------------------------------HHHH T ss_conf 1008993899999889---999999998943786899---------------------------------------9999 Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCC--CCEEEEECCCCCCCCHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHC Q ss_conf 999889872024467766430000102217--833530024786324267733200225689---999999999989744 Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTE--RDVITMEWIDGVKISDTEKLRACGHDLERL---SVTLVQSFLLHTLRD 281 (517) Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st--~~VLvmE~i~G~~i~d~~~l~~~~~d~~~l---a~~l~~~~~~qi~~~ 281 (517) T Consensus 41 ~E~~il~~l~H-----pnI--v~l~g~~~~~~~~~iv~Ey~~~g~L~~~l~~~~~~l~~~~~~~~~~~ia~g-l~yLH~~ 112 (250) T cd05085 41 SEARILKQYDH-----PNI--VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAG-MAYLESK 112 (250) T ss_pred HHHHHHHHCCC-----CCE--EEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHHHC T ss_conf 99999986799-----998--319999988998999997589982899997468999999999999999999-9998429 Q ss_pred CEECCCCCCCEEEEECCCCEEEEECCHHEECCH Q ss_conf 866178786228980289535743403121698 Q gi|254780623|r 282 GFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517) Q Consensus 282 GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517) T Consensus 113 ~iiHrDlK~~NiLv~~~~~~Kl~DFGls~~~~~ 145 (250) T cd05085 113 NCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250) T ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCCEECCC T ss_conf 964475374636688999689996677887799

HHsearch alignment for GI: 254780623 and conserved domain: cd05085