HHsearch alignment for GI: 254780623 and conserved domain: cd05088

>cd05088 PTKc_Tie2 Catalytic Domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.61  E-value=7.5e-07  Score=72.27  Aligned_cols=145  Identities=14%  Similarity=0.162  Sum_probs=83.0

Q ss_pred             HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r  120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ  197 (517)
Q Consensus       120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~  197 (517)
T Consensus         6 ~~d~~~~~~IG~G~fG~Vyk~~~~~~g~~~~vavK~~~~~~~~----~--------------------------------   49 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK----D--------------------------------   49 (303)
T ss_pred             HHHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCH----H--------------------------------
T ss_conf             7995887799507784999999938997999999997844484----7--------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHH---------------HC
Q ss_conf             8788865599998898720244677664300001022--178335300247863242677332---------------00
Q gi|254780623|r  198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRA---------------CG  260 (517)
Q Consensus       198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~---------------~~  260 (517)
T Consensus        50 ---~~~~f~~E~~il~~l~~----HpnIv--~l~g~~~~~~~~~lv~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~~  120 (303)
T cd05088          50 ---DHRDFAGELEVLCKLGH----HPNII--NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST  120 (303)
T ss_pred             ---HHHHHHHHHHHHHHCCC----CCCEE--EEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCC
T ss_conf             ---89999999999986269----99888--8988983289789999747998599999754665556201002354567


Q ss_pred             CCHH---HHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHE
Q ss_conf             2256---8999999999998974486617878622898028953574340312
Q gi|254780623|r  261 HDLE---RLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITG  310 (517)
Q Consensus       261 ~d~~---~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg  310 (517)
T Consensus       121 l~~~~~l~i~~qIa~g-l~yLH~~~IiHRDLKp~NILl~~~~~~KI~DFGls~  172 (303)
T cd05088         121 LSSQQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHCCCEEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf             8999999999999999-998711986745577411788899978998267786