HHsearch alignment for GI: 254780623 and conserved domain: cd05088
>cd05088 PTKc_Tie2 Catalytic Domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.61 E-value=7.5e-07 Score=72.27 Aligned_cols=145 Identities=14% Similarity=0.162 Sum_probs=83.0
Q ss_pred HHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99867--6667788886555502128887236876403104688777788999875321146854334691799999998
Q gi|254780623|r 120 YCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ 197 (517)
Q Consensus 120 F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 197 (517)
T Consensus 6 ~~d~~~~~~IG~G~fG~Vyk~~~~~~g~~~~vavK~~~~~~~~----~-------------------------------- 49 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK----D-------------------------------- 49 (303)
T ss_pred HHHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCH----H--------------------------------
T ss_conf 7995887799507784999999938997999999997844484----7--------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHH---------------HC
Q ss_conf 8788865599998898720244677664300001022--178335300247863242677332---------------00
Q gi|254780623|r 198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRA---------------CG 260 (517)
Q Consensus 198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~---------------~~ 260 (517)
T Consensus 50 ---~~~~f~~E~~il~~l~~----HpnIv--~l~g~~~~~~~~~lv~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~~ 120 (303)
T cd05088 50 ---DHRDFAGELEVLCKLGH----HPNII--NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 120 (303)
T ss_pred ---HHHHHHHHHHHHHHCCC----CCCEE--EEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCC
T ss_conf ---89999999999986269----99888--8988983289789999747998599999754665556201002354567
Q ss_pred CCHH---HHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHE
Q ss_conf 2256---8999999999998974486617878622898028953574340312
Q gi|254780623|r 261 HDLE---RLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITG 310 (517)
Q Consensus 261 ~d~~---~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg 310 (517)
T Consensus 121 l~~~~~l~i~~qIa~g-l~yLH~~~IiHRDLKp~NILl~~~~~~KI~DFGls~ 172 (303)
T cd05088 121 LSSQQLLHFAADVARG-MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 172 (303)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHCCCEEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf 8999999999999999-998711986745577411788899978998267786