HHsearch alignment for GI: 254780623 and conserved domain: cd05116
>cd05116 PTKc_Syk Catalytic Domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.70 E-value=3.4e-07 Score=74.97 Aligned_cols=141 Identities=18% Similarity=0.220 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 66778888655550212888723687640310468877778899987532114685433469179999999887888655
Q gi|254780623|r 126 PIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDL 205 (517)
Q Consensus 126 PlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~ 205 (517)
T Consensus 2 ~LG~G~fG~V~~g~~~~~~~~~~VAvK~~~~~~~--------------------~~--------~~~~----------~~ 43 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--------------------DP--------ALKD----------EL 43 (257)
T ss_pred CCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCC--------------------CH--------HHHH----------HH
T ss_conf 0430888099998999789997999999853569--------------------97--------9999----------99
Q ss_pred HHHHHHHHHHHCCCCCCCC-CCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHH-CCC---HHHHHHHHHHHHHHHHHH
Q ss_conf 9999889872024467766-43000010221783353002478632426773320-022---568999999999998974
Q gi|254780623|r 206 RLEAAAFSEMAENTVKDQG-FRVPKIDWNRTERDVITMEWIDGVKISDTEKLRAC-GHD---LERLSVTLVQSFLLHTLR 280 (517)
Q Consensus 206 ~~Ea~n~~~~~~~~~~~~~-v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~-~~d---~~~la~~l~~~~~~qi~~ 280 (517)
T Consensus 44 ~~E~~~l~~l~H-----pnIv~~~g~~~--~~~~~ivmE~~~~g~L~~~L--~~~~~~~~~~~~~~~~qia~g-l~yLH~ 113 (257)
T cd05116 44 LREANVMQQLDN-----PYIVRMIGICE--AESWMLVMELAELGPLNKFL--QKNKHVTEKNITELVHQVSMG-MKYLEE 113 (257)
T ss_pred HHHHHHHHHCCC-----CCEEEEEEEEE--CCCEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 999999986799-----98805889995--89479999858999999998--537999999999999999999-999986
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 4866178786228980289535743403121698
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 114 ~~ivHrDLK~~NiLl~~~~~~Kl~DFGls~~~~~ 147 (257)
T cd05116 114 TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf 8937661676558884899789997476426679