HHsearch alignment for GI: 254780623 and conserved domain: cd05118
>cd05118 STKc_CMGC The catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals.
Probab=98.71 E-value=3.1e-08 Score=83.03 Aligned_cols=138 Identities=19% Similarity=0.238 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 5 ~~lG~G~fg~Vy~~~~~~--~~~~~AiK~i~~~~~~--------------------~------------~~~~~------ 44 (283)
T cd05118 5 GKIGEGTYGVVYKARDKL--TGEIVAIKKIKLRFES--------------------E------------GIPKT------ 44 (283)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCC--------------------H------------HHHHH------
T ss_conf 894226694999999889--9989999998334539--------------------5------------88999------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHC--CCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH----
Q ss_conf 5999988987202446776643000010221--7833530024786324267733200225689999999999989----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRT--ERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT---- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~s--t~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi---- 278 (517)
T Consensus 45 ~~~E~~il~~l~H-----pn--Iv~~~~~~~~~~~~~lvmEy~~~~l~~~l~---~~~---~~l~e~~~~~~~~qil~al 111 (283)
T cd05118 45 ALREIKLLKELNH-----PN--IIKLLDVFRHKGDLYLVFEFMDTDLYKLIK---DRQ---RGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHHHHHHCCC-----CC--CCEEEEEEEECCEEEEEEECCCCCHHHHHH---HCC---CCCCHHHHHHHHHHHHHHH
T ss_conf 9999999986799-----89--893999999899999998177886579999---728---9989999999999999999
Q ss_pred ---HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf ---7448661787862289802895357434031216989
Q gi|254780623|r 279 ---LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 ---~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 112 ~yLH~~~IiHRDlKPeNILl~~~~~iKl~DFG~a~~~~~~ 151 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred HHHHHCCEEECCCCHHHEEECCCCCEEEEEECCCEECCCC
T ss_conf 9999799660437656668989998899840456252688