HHsearch alignment for GI: 254780623 and conserved domain: cd05164

>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=95.53  E-value=0.034  Score=36.15  Aligned_cols=84  Identities=18%  Similarity=0.194  Sum_probs=44.7

Q ss_pred             CCCCHHCCCHHCCCCEEEEECCCCCC-CCHHH--HHHHHCCCHHH---HHHHHHHHHHH-HHHHCCEECCCCCCCEEEEE
Q ss_conf             64300001022178335300247863-24267--73320022568---99999999999-89744866178786228980
Q gi|254780623|r  224 GFRVPKIDWNRTERDVITMEWIDGVK-ISDTE--KLRACGHDLER---LSVTLVQSFLL-HTLRDGFFHADLHPGNLFVD  296 (517)
Q Consensus       224 ~v~vP~vy~~~st~~VLvmE~i~G~~-i~d~~--~l~~~~~d~~~---la~~l~~~~~~-qi~~~GfFHaDPHpGNi~v~  296 (517)
T Consensus        69 ~~~~Y~Vip--ls~~~GlIe~V~~~~tl~~il~~~~~~~~~~~~~~~~~r~~F~~S~A~~sv~~yilglgDRH~~NIl~~  146 (222)
T cd05164          69 TIRTYAVIP--LNSRSGLIEWVEGTTTLKPVLKKWFWLQFPDPEQWFAARKNYTRSTAVMSIVGYILGLGDRHLDNILID  146 (222)
T ss_pred             EEECCEEEE--CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             336351876--479841699918961267999999999792989999999999999999999999712588886657776


Q ss_pred             C-CCCEEEEECCHH
Q ss_conf             2-895357434031
Q gi|254780623|r  297 S-KGYIVAVDMGIT  309 (517)
Q Consensus       297 ~-dg~i~~lDfG~v  309 (517)
T Consensus       147 ~~tG~v~HIDFg~~  160 (222)
T cd05164         147 RETGEVVHIDFGCI  160 (222)
T ss_pred             CCCCCEEEEEHHHH
T ss_conf             48774899841876