HHsearch alignment for GI: 254780623 and conserved domain: cd05589

>cd05589 STKc_PKN STKc_PKN: Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, ce
Probab=98.60  E-value=2.1e-07  Score=76.52  Aligned_cols=141  Identities=15%  Similarity=0.147  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         5 ~~lG~G~fG~V~la~~~~--t~~~~AiK~i~k~~~----------------~~~-----------~---~-~~~~~~E--   49 (324)
T cd05589           5 AVLGRGHFGKVLLAEYKK--TGELYAIKALKKGDI----------------IAR-----------D---E-VESLMCE--   49 (324)
T ss_pred             EEEECCCCCEEEEEEECC--CCCEEEEEEEEHHHC----------------CCH-----------H---H-HHHHHHH--
T ss_conf             998227381999999999--998999999857884----------------274-----------7---9-9999999--


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300001022178--335300247863242677332002256---899999999999897
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQSFLLHTL  279 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~~~~~qi~  279 (517)
T Consensus        50 ----~~il~~~~~-~-~HP~--Iv~l~~~f~~~~~~ylvmEy~~gGdL~~~--i~~~~l~e~~~~~~~~qi~~a-L~ylH  118 (324)
T cd05589          50 ----KRIFETANS-E-RHPF--LVNLFACFQTEDHVCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVVLG-LQYLH  118 (324)
T ss_pred             ----HHHHHHHHH-C-CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHCCCCCHHHHHHHHHHHHHH-HHHHH
T ss_conf             ----999999864-7-9999--89499999989999999977999869999--743899999999999999999-99999


Q ss_pred             HCCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf             44866178786228980289535743403121
Q gi|254780623|r  280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGR  311 (517)
Q Consensus       280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~  311 (517)
T Consensus       119 ~~~IiHRDlKPeNILl~~~g~iKL~DFGlak~  150 (324)
T cd05589         119 ENKIVYRDLKLDNLLLDTEGYVKIADFGLCKE  150 (324)
T ss_pred             HCCEEEEECCCCCCCCCCCCCEEEEECCHHHH
T ss_conf             78988985365442136899889965111121