HHsearch alignment for GI: 254780623 and conserved domain: cd05589
>cd05589 STKc_PKN STKc_PKN: Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, ce
Probab=98.60 E-value=2.1e-07 Score=76.52 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 5 ~~lG~G~fG~V~la~~~~--t~~~~AiK~i~k~~~----------------~~~-----------~---~-~~~~~~E-- 49 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKK--TGELYAIKALKKGDI----------------IAR-----------D---E-VESLMCE-- 49 (324)
T ss_pred EEEECCCCCEEEEEEECC--CCCEEEEEEEEHHHC----------------CCH-----------H---H-HHHHHHH--
T ss_conf 998227381999999999--998999999857884----------------274-----------7---9-9999999--
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022178--335300247863242677332002256---899999999999897
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQSFLLHTL 279 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~~~~~qi~ 279 (517)
T Consensus 50 ----~~il~~~~~-~-~HP~--Iv~l~~~f~~~~~~ylvmEy~~gGdL~~~--i~~~~l~e~~~~~~~~qi~~a-L~ylH 118 (324)
T cd05589 50 ----KRIFETANS-E-RHPF--LVNLFACFQTEDHVCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVVLG-LQYLH 118 (324)
T ss_pred ----HHHHHHHHH-C-CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHCCCCCHHHHHHHHHHHHHH-HHHHH
T ss_conf ----999999864-7-9999--89499999989999999977999869999--743899999999999999999-99999
Q ss_pred HCCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf 44866178786228980289535743403121
Q gi|254780623|r 280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 119 ~~~IiHRDlKPeNILl~~~g~iKL~DFGlak~ 150 (324)
T cd05589 119 ENKIVYRDLKLDNLLLDTEGYVKIADFGLCKE 150 (324)
T ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCHHHH
T ss_conf 78988985365442136899889965111121