HHsearch alignment for GI: 254780623 and conserved domain: cd05616
>cd05616 STKc_cPKC_beta STKc_cPKC_beta: Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicin
Probab=98.62 E-value=4.7e-07 Score=73.84 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 k~LG~G~fG~V~la~~~~--t~~~~AiK~i~k~~~~--~~----------------------------~~~~-~~----- 47 (323)
T cd05616 6 MVLGKGSFGKVMLAERKG--TDELYAIKILKKDVVI--QD----------------------------DDVE-CT----- 47 (323)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCC--CH----------------------------HHHH-HH-----
T ss_conf 795227680999999999--9989999998278843--84----------------------------7899-99-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCC-CH---HHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022178--335300247863242677332002-25---689999999999989
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGH-DL---ERLSVTLVQSFLLHT 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~-d~---~~la~~l~~~~~~qi 278 (517)
T Consensus 48 -~~E~~il~~~~----~~p~--Iv~l~~~f~~~~~lylVmEy~~gGdL~~~--l~~~~~l~e~~~~~~~~qi~~a-L~yL 117 (323)
T cd05616 48 -MVEKRVLALSG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYQ--IQQVGRFKEPHAVFYAAEIAIG-LFFL 117 (323)
T ss_pred -HHHHHHHHHHC----CCCE--EEEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHH
T ss_conf -99999999717----9992--85999999989999999958899808999--9981999989999999999999-9999
Q ss_pred HHCCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf 744866178786228980289535743403121
Q gi|254780623|r 279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 118 H~~~IiHRDLKPeNILl~~~g~iKL~DFGlak~ 150 (323)
T cd05616 118 HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred HHCCCCCCCCCCCCEEECCCCCEEEEEHHHHHH
T ss_conf 877975025477661476899778853215444