HHsearch alignment for GI: 254780623 and conserved domain: cd05619
>cd05619 STKc_nPKC_theta STKc_nPKC_theta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other
Probab=98.60 E-value=2.6e-07 Score=75.84 Aligned_cols=137 Identities=19% Similarity=0.274 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67788886555502128887236876403104688777788999875321146854334691799999998878886559
Q gi|254780623|r 127 IAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLR 206 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~ 206 (517)
T Consensus 3 IG~G~fG~V~la~~~~--t~~~~AiK~i~k~~~~---~----------------~-----------~~~~-~~------~ 43 (316)
T cd05619 3 LGKGSFGKVFLAELKG--TNQFFAIKALKKDVVL---M----------------D-----------DDVE-CT------M 43 (316)
T ss_pred EEECCCEEEEEEEECC--CCCEEEEEEECHHHCC---C----------------C-----------HHHH-HH------H
T ss_conf 4328895999999999--9989999998178733---7----------------1-----------5899-99------9
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHC-CCH---HHHHHHHHHHHHHHHHH
Q ss_conf 9998898720244677664300001022178--33530024786324267733200-225---68999999999998974
Q gi|254780623|r 207 LEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACG-HDL---ERLSVTLVQSFLLHTLR 280 (517)
Q Consensus 207 ~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~-~d~---~~la~~l~~~~~~qi~~ 280 (517)
T Consensus 44 ~E~~il~~~---~-~Hp~--Iv~l~~~f~~~~~lylvmEy~~gGdL~~~--l~~~~~~~~~~a~~~~~qi~~a-L~ylH~ 114 (316)
T cd05619 44 VEKRVLSLA---W-EHPF--LTHLYCTFQTKENLFFVMEYLNGGDLMFH--IQSCHKFDLPRATFYAAEIICG-LQFLHS 114 (316)
T ss_pred HHHHHHHHH---C-CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 999999973---7-9998--88599999989999999975699878887--8643899999999999999999-999987
Q ss_pred CCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf 4866178786228980289535743403121
Q gi|254780623|r 281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 115 ~~IiHRDlKpeNILl~~~g~iKL~DFGlak~ 145 (316)
T cd05619 115 KGIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred CCEEECCCCCCCCCCCCCCCEEEECCCHHHH
T ss_conf 8947443476565525799778731125665