HHsearch alignment for GI: 254780623 and conserved domain: cd05629
>cd05629 STKc_NDR_like_fungal STKc_NDR_like_fungal: Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play s
Probab=98.69 E-value=6e-08 Score=80.79 Aligned_cols=137 Identities=18% Similarity=0.288 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 k~lG~G~fG~V~~a~~~~--tg~~~AiK~i~k~~----------------~----------~~-~~----~~~~~----- 48 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKD--TGKIYAMKTLLKSE----------------M----------FK-KD----QLAHV----- 48 (377)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHH----------------C----------CC-HH----HHHHH-----
T ss_conf 782228583999999889--99899999984688----------------0----------58-89----99999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH-----
Q ss_conf 5999988987202446776643000010221783--353002478632426773320022568999999999998-----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLH----- 277 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~q----- 277 (517)
T Consensus 49 -~~E~~il~~~-----~hp~--Iv~l~~~f~~~~~~ylvmEy~~ggdL~~~--l~~~~~----~~e~~~~~~~~qi~~al 114 (377)
T cd05629 49 -KAERDVLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTM--LIKYDT----FSEDVTRFYMAECVLAI 114 (377)
T ss_pred -HHHHHHHHHC-----CCCC--CCEEEEEEEECCEEEEEEECCCCCCHHHH--HHHCCC----CCHHHHHHHHHHHHHHH
T ss_conf -9999999868-----9998--79499999989999999958999748899--986499----99999999999999999
Q ss_pred --HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECC
Q ss_conf --974486617878622898028953574340312169
Q gi|254780623|r 278 --TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLS 313 (517)
Q Consensus 278 --i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~ 313 (517)
T Consensus 115 ~~lH~~giiHRDlKPeNILl~~~g~iKL~DFGls~~~~ 152 (377)
T cd05629 115 EAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred HHHHHCEEEECCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf 99874728964576555898799988981266763433