HHsearch alignment for GI: 254780623 and conserved domain: cd06606

>cd06606 STKc_MAPKKK Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included
Probab=98.84  E-value=1.3e-08  Score=85.80  Aligned_cols=142  Identities=20%  Similarity=0.270  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         6 ~~IG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~~----------------------------~~~~----------~   45 (259)
T cd06606           6 KLLGRGSFGSVYLALSKD--TGELVAVKSVELSSDSE----------------------------EELE----------S   45 (259)
T ss_pred             EEEECCCCEEEEEEEECC--CCCEEEEEEECHHCCCH----------------------------HHHH----------H
T ss_conf             796318992999999999--99899999984310898----------------------------9999----------9


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCH--HCCCHHCCCCEEEEECCCCCCCCHHHHHHHH-CCCH---HHHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300--0010221783353002478632426773320-0225---689999999999989
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVP--KIDWNRTERDVITMEWIDGVKISDTEKLRAC-GHDL---ERLSVTLVQSFLLHT  278 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP--~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~-~~d~---~~la~~l~~~~~~qi  278 (517)
T Consensus        46 ~~~E~~~l~~l~-----hpnI-v~~~~~~~~~~~~~~lvmEy~~~g~L~~~i--~~~~~~~e~~~~~~~~qi~~al-~yl  116 (259)
T cd06606          46 LEREIRILSKLQ-----HPNI-VRYYGCEVTEENTLNIFMEYVSGGSLASLL--KKFGKLPEPVIRRYTRQILEGL-AYL  116 (259)
T ss_pred             HHHHHHHHHHCC-----CCCE-EEEEEEEEECCCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHHH-HHH
T ss_conf             999999998779-----9898-079899994798899999789998899999--8659999999999999999999-999


Q ss_pred             HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             7448661787862289802895357434031216989
Q gi|254780623|r  279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       117 H~~~iiHrDlKp~NILl~~~~~iKl~DFGla~~~~~~  153 (259)
T cd06606         117 HSNGIVHRDIKGANILLDSDGVVKLADFGCAKRLASI  153 (259)
T ss_pred             HHCCEEECCCCHHHEEECCCCCEEEEECCCEEECCCC
T ss_conf             9799984403889969878998999987824896777