HHsearch alignment for GI: 254780623 and conserved domain: cd06606
>cd06606 STKc_MAPKKK Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included
Probab=98.84 E-value=1.3e-08 Score=85.80 Aligned_cols=142 Identities=20% Similarity=0.270 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 ~~IG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~~----------------------------~~~~----------~ 45 (259)
T cd06606 6 KLLGRGSFGSVYLALSKD--TGELVAVKSVELSSDSE----------------------------EELE----------S 45 (259)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHCCCH----------------------------HHHH----------H
T ss_conf 796318992999999999--99899999984310898----------------------------9999----------9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCH--HCCCHHCCCCEEEEECCCCCCCCHHHHHHHH-CCCH---HHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300--0010221783353002478632426773320-0225---689999999999989
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVP--KIDWNRTERDVITMEWIDGVKISDTEKLRAC-GHDL---ERLSVTLVQSFLLHT 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP--~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~-~~d~---~~la~~l~~~~~~qi 278 (517)
T Consensus 46 ~~~E~~~l~~l~-----hpnI-v~~~~~~~~~~~~~~lvmEy~~~g~L~~~i--~~~~~~~e~~~~~~~~qi~~al-~yl 116 (259)
T cd06606 46 LEREIRILSKLQ-----HPNI-VRYYGCEVTEENTLNIFMEYVSGGSLASLL--KKFGKLPEPVIRRYTRQILEGL-AYL 116 (259)
T ss_pred HHHHHHHHHHCC-----CCCE-EEEEEEEEECCCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHHH-HHH
T ss_conf 999999998779-----9898-079899994798899999789998899999--8659999999999999999999-999
Q ss_pred HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 7448661787862289802895357434031216989
Q gi|254780623|r 279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 117 H~~~iiHrDlKp~NILl~~~~~iKl~DFGla~~~~~~ 153 (259)
T cd06606 117 HSNGIVHRDIKGANILLDSDGVVKLADFGCAKRLASI 153 (259)
T ss_pred HHCCEEECCCCHHHEEECCCCCEEEEECCCEEECCCC
T ss_conf 9799984403889969878998999987824896777