HHsearch alignment for GI: 254780623 and conserved domain: cd06613

>cd06613 STKc_MAP4K3_like Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-bindin
Probab=98.73  E-value=1.7e-08  Score=85.02  Aligned_cols=140  Identities=19%  Similarity=0.242  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             76667788886555502128887236876403104688777788999875321146854334691799999998878886
Q gi|254780623|r  124 DDPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM  203 (517)
Q Consensus       124 dePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  203 (517)
T Consensus         8 ~~~iG~G~fg~V~~~~~~~--~g~~~AiK~~~~~-----------------------~-------~~---~~-------~   45 (261)
T cd06613           8 LQRIGSGTYGDVYKARDIA--TGELAAVKVIKLE-----------------------P-------GD---DF-------E   45 (261)
T ss_pred             EEEEECCCCEEEEEEEECC--CCCEEEEEEEECC-----------------------C-------HH---HH-------H
T ss_conf             1098417583999999889--9989999998058-----------------------6-------65---79-------9


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCC--EEEEECCCCCCCCHHHHHHHHC-CCH---HHHHHHHHHHHHHH
Q ss_conf             55999988987202446776643000010221783--3530024786324267733200-225---68999999999998
Q gi|254780623|r  204 DLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERD--VITMEWIDGVKISDTEKLRACG-HDL---ERLSVTLVQSFLLH  277 (517)
Q Consensus       204 D~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~--VLvmE~i~G~~i~d~~~l~~~~-~d~---~~la~~l~~~~~~q  277 (517)
T Consensus        46 ~~~~Ei~il~~l~H-----p--nIv~~~~~~~~~~~~~ivmEy~~~g~L~~~~--~~~~~~~e~~i~~~~~qil~a-L~y  115 (261)
T cd06613          46 IIQQEISMLKECRH-----P--NIVAYFGSYLRRDKLWIVMEYCGGGSLQDIY--QVTGPLSELQIAYVCRETLKG-LAY  115 (261)
T ss_pred             HHHHHHHHHHHCCC-----C--CCCEEEEEEEECCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHH-HHH
T ss_conf             99999999986799-----8--9992999999899999999797989099999--734999999999999999999-999


Q ss_pred             HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             97448661787862289802895357434031216989
Q gi|254780623|r  278 TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       278 i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       116 lH~~~iiHRDiKp~NILl~~~~~vKi~DFGla~~~~~~  153 (261)
T cd06613         116 LHSQGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT  153 (261)
T ss_pred             HHHCCCEECCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf             99889053456779879889999999258266575687