HHsearch alignment for GI: 254780623 and conserved domain: cd06619
>cd06619 PKc_MKK5 Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (
Probab=98.78 E-value=1.8e-08 Score=84.89 Aligned_cols=140 Identities=20% Similarity=0.232 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 76667788886555502128887236876403104688777788999875321146854334691799999998878886
Q gi|254780623|r 124 DDPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM 203 (517)
Q Consensus 124 dePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 203 (517)
T Consensus 6 ~e~iG~G~fg~Vy~a~~~~--t~~~vAiK~i~~~~~---------------------------------~~~~~~~---- 46 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLL--TRRILAVKVIPLDIT---------------------------------VELQKQI---- 46 (279)
T ss_pred EEEEECCCCEEEEEEEECC--CCCEEEEEEECHHCC---------------------------------HHHHHHH----
T ss_conf 7898517892999999999--997999999884319---------------------------------8999999----
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5599998898720244677664300001022178--33530024786324267733200225689999999999989744
Q gi|254780623|r 204 DLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTLRD 281 (517)
Q Consensus 204 D~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~~~ 281 (517)
T Consensus 47 --~~Ei~il~~l~-----hpn--Iv~~~~~~~~~~~~~iv~E~~~gg~L~~~~~~~e~--~~~~i~~qi~~a-L~ylH~~ 114 (279)
T cd06619 47 --MSELEILYKCD-----SPY--IIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEH--VLGRIAVAVVKG-LTYLWSL 114 (279)
T ss_pred --HHHHHHHHHCC-----CCC--CCEEEEEEEECCEEEEEEECCCCCCHHHHHCCCHH--HHHHHHHHHHHH-HHHHHHC
T ss_conf --99999998679-----999--99197999989998999971699859998568999--999999999999-9999978
Q ss_pred CEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 866178786228980289535743403121698
Q gi|254780623|r 282 GFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 282 GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 115 ~iiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 147 (279)
T cd06619 115 KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred CEEECCCCCCCCCCCCCCCEEECCCCCCEECCC
T ss_conf 905353677664388999999855836425478