HHsearch alignment for GI: 254780623 and conserved domain: cd06622
>cd06622 PKc_MAPKK_PBS2_like Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cer
Probab=98.70 E-value=4.1e-08 Score=82.05 Aligned_cols=142 Identities=16% Similarity=0.227 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~IG~G~fg~Vy~a~~~~--t~~~vAiK~i~~~~~~-----------------------------~~~~----------~ 45 (286)
T cd06622 7 DELGKGNYGSVYKVLHRP--TGVTMAMKEIRLELDE-----------------------------SKFN----------Q 45 (286)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCH-----------------------------HHHH----------H
T ss_conf 896138790999999989--9969999998644098-----------------------------9999----------9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHH-H-HHCCCH---HHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022178--3353002478632426773-3-200225---68999999999998
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKL-R-ACGHDL---ERLSVTLVQSFLLH 277 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l-~-~~~~d~---~~la~~l~~~~~~q 277 (517)
T Consensus 46 ~~~Ei~il~~l~h-----pn--Iv~l~~~~~~~~~~~ivmE~~~~G~L~~l~~~~~~~~~~~e~~~~~i~~ql~~gL~yl 118 (286)
T cd06622 46 IIMELDILHKAVS-----PY--IVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFL 118 (286)
T ss_pred HHHHHHHHHHCCC-----CC--EECCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999999986799-----98--9435418998998999998079991999986033357899999999999999999999
Q ss_pred HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 9744866178786228980289535743403121698
Q gi|254780623|r 278 TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 278 i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 119 H~~~~IiHRDIKP~NILi~~~g~vKl~DFG~a~~~~~ 155 (286)
T cd06622 119 KEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred HHHCCEEECCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf 8728974155777766688999899973788866566