HHsearch alignment for GI: 254780623 and conserved domain: cd06622

>cd06622 PKc_MAPKK_PBS2_like Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cer
Probab=98.70  E-value=4.1e-08  Score=82.05  Aligned_cols=142  Identities=16%  Similarity=0.227  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         7 ~~IG~G~fg~Vy~a~~~~--t~~~vAiK~i~~~~~~-----------------------------~~~~----------~   45 (286)
T cd06622           7 DELGKGNYGSVYKVLHRP--TGVTMAMKEIRLELDE-----------------------------SKFN----------Q   45 (286)
T ss_pred             EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCH-----------------------------HHHH----------H
T ss_conf             896138790999999989--9969999998644098-----------------------------9999----------9


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHH-H-HHCCCH---HHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300001022178--3353002478632426773-3-200225---68999999999998
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKL-R-ACGHDL---ERLSVTLVQSFLLH  277 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l-~-~~~~d~---~~la~~l~~~~~~q  277 (517)
T Consensus        46 ~~~Ei~il~~l~h-----pn--Iv~l~~~~~~~~~~~ivmE~~~~G~L~~l~~~~~~~~~~~e~~~~~i~~ql~~gL~yl  118 (286)
T cd06622          46 IIMELDILHKAVS-----PY--IVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFL  118 (286)
T ss_pred             HHHHHHHHHHCCC-----CC--EECCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9999999986799-----98--9435418998998999998079991999986033357899999999999999999999


Q ss_pred             HHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             9744866178786228980289535743403121698
Q gi|254780623|r  278 TLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       278 i~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       119 H~~~~IiHRDIKP~NILi~~~g~vKl~DFG~a~~~~~  155 (286)
T cd06622         119 KEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA  155 (286)
T ss_pred             HHHCCEEECCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf             8728974155777766688999899973788866566