HHsearch alignment for GI: 254780623 and conserved domain: cd06623
>cd06623 PKc_MAPKK_plant_like Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania m
Probab=98.89 E-value=2.2e-09 Score=91.96 Aligned_cols=141 Identities=18% Similarity=0.271 Sum_probs=90.0
Q ss_pred HHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 867--666778888655550212888723687640310468877778899987532114685433469179999999887
Q gi|254780623|r 122 EFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVT 199 (517)
Q Consensus 122 ~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 199 (517)
T Consensus 2 d~~~~~~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~---------------------------------~~~~~-- 44 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKP--TGKIYALKKIHVDGD---------------------------------EEFRK-- 44 (264)
T ss_pred CCEEEEEEECCCCEEEEEEEECC--CCCEEEEEEECCCCC---------------------------------HHHHH--
T ss_conf 97385898317893999999989--998999999821469---------------------------------78999--
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88865599998898720244677664300001022178335300247863242677332002256899999999999897
Q gi|254780623|r 200 KMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTL 279 (517)
Q Consensus 200 ~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~ 279 (517)
T Consensus 45 ----~~~~E~~il~~l~H----pnIV~~~~~~~~-~~~~~lvmEy~~~G~L~~~i--~~~~----~~~e~~~~~~~~qi~ 109 (264)
T cd06623 45 ----QLLRELKTLRSCES----PYVVKCYGAFYK-EGEISIVLEYMDGGSLADLL--KKVG----KIPEPVLAYIARQIL 109 (264)
T ss_pred ----HHHHHHHHHHHCCC----CCCCEEEEEEEE-CCEEEEEEECCCCCCHHHHH--HHCC----CCCHHHHHHHHHHHH
T ss_conf ----99999999986799----988829999988-99999999789998499999--7348----989999999999999
Q ss_pred -------H-CCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf -------4-4866178786228980289535743403121698
Q gi|254780623|r 280 -------R-DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 280 -------~-~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 110 ~gl~yLH~~~~IiHRDlKp~NILl~~~~~iKl~DFG~a~~~~~ 152 (264)
T cd06623 110 KGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred HHHHHHHHCCCEECCCCCHHHEEECCCCCEEEECCCCCEECCC
T ss_conf 9999998708988044788996988999999921878858678