HHsearch alignment for GI: 254780623 and conserved domain: cd06626
>cd06626 STKc_MEKK4 Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs,
Probab=98.76 E-value=2.3e-08 Score=84.00 Aligned_cols=141 Identities=22% Similarity=0.239 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 ~~lG~G~~g~Vy~~~~~~--~~~~vAiK~i~~--------------------~~-------~~~---------~--~~~~ 45 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLD--TGELMAVKEIRI--------------------QD-------NDP---------K--TIKE 45 (264)
T ss_pred CEEECCCCEEEEEEEECC--CCCEEEEEEECH--------------------HH-------CCH---------H--HHHH
T ss_conf 498217481999999889--998999999810--------------------00-------897---------9--9999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHH--CCCCEEEEECCCCCCCCHHHHHHHHCCCHHH----HHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022--1783353002478632426773320022568----9999999999989
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNR--TERDVITMEWIDGVKISDTEKLRACGHDLER----LSVTLVQSFLLHT 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~--st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~----la~~l~~~~~~qi 278 (517)
T Consensus 46 ~~~E~~il~~l~H-----pnI--v~~~~~~~~~~~~~lvmE~~~~g~L~~~l--~~~~~~~e~~~~~~~~qi~~al-~yl 115 (264)
T cd06626 46 IADEMKVLELLKH-----PNL--VKYYGVEVHREKVYIFMEYCSGGTLEELL--EHGRILDEHVIRVYTLQLLEGL-AYL 115 (264)
T ss_pred HHHHHHHHHHCCC-----CCC--CEEEEEEEECCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHHH-HHH
T ss_conf 9999999987799-----898--94999998899999999789999699999--7079999999999999999999-999
Q ss_pred HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 7448661787862289802895357434031216989
Q gi|254780623|r 279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 116 H~~~iiHRDlKp~NILl~~~~~vKl~DFG~a~~~~~~ 152 (264)
T cd06626 116 HSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred HHCCEEECCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 9899453755789956889996999547674586778