HHsearch alignment for GI: 254780623 and conserved domain: cd06631

>cd06631 STKc_YSK4 Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.54  E-value=5.2e-08  Score=81.23  Aligned_cols=144  Identities=17%  Similarity=0.197  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD  204 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD  204 (517)
T Consensus         6 ~~lG~G~fg~V~~~~~~---~g~~vAiK~v~~~~~---------------------------~~~~~~~-------~~~~   48 (265)
T cd06631           6 EVLGKGAYGTVYCGLTN---QGQLIAVKQVELDTS---------------------------NVLAAEK-------EYEK   48 (265)
T ss_pred             CEEECCCCCEEEEEEEC---CCCEEEEEEEEECCC---------------------------CHHHHHH-------HHHH
T ss_conf             48801789199999958---999999999981553---------------------------2145599-------9999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHH----HHHHHHHHHHHHHHHH
Q ss_conf             599998898720244677664300001022178335300247863242677332002256----8999999999998974
Q gi|254780623|r  205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLE----RLSVTLVQSFLLHTLR  280 (517)
Q Consensus       205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~----~la~~l~~~~~~qi~~  280 (517)
T Consensus        49 ~~~Ei~il~~l~H----pniv~~~~~~~~-~~~~~ivmEy~~gg~L~~~--l~~~~~~~e~~~~~~~~qi~~gl-~yLH~  120 (265)
T cd06631          49 LQEEVDLLKSLKH----VNIVQYLGTCLD-DNTISIFMEFVPGGSISSI--LNRFGPLPEPVFCKYTKQILDGV-AYLHN  120 (265)
T ss_pred             HHHHHHHHHHCCC----CCEEEEEEEEEE-CCEEEEEEECCCCCCHHHH--HHHCCCCCHHHHHHHHHHHHHHH-HHHHH
T ss_conf             9999999986899----997269999988-9989999991598948999--98649999999999999999999-99998


Q ss_pred             CCEECCCCCCCEEEEECCCCEEEEECCHHEECC
Q ss_conf             486617878622898028953574340312169
Q gi|254780623|r  281 DGFFHADLHPGNLFVDSKGYIVAVDMGITGRLS  313 (517)
Q Consensus       281 ~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~  313 (517)
T Consensus       121 ~giiHRDlKp~NiLl~~~~~vKl~DFG~ak~~~  153 (265)
T cd06631         121 NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA  153 (265)
T ss_pred             CCCCCCCCCHHHEEECCCCCEEEECCCCCCCCC
T ss_conf             888313278899238899989990375761444