HHsearch alignment for GI: 254780623 and conserved domain: cd06643
>cd06643 STKc_SLK Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.81 E-value=2.2e-08 Score=84.10 Aligned_cols=148 Identities=16% Similarity=0.153 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999986766677888865555021288872368764031046887777889998753211468543346917999999
Q gi|254780623|r 116 IEELYCEFDDPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRAL 195 (517)
Q Consensus 116 ~~~~F~~fdePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~ 195 (517)
T Consensus 3 ~~d~Y~il-~~iG~G~fg~Vy~a~~~~--~~~~~AvK~~~~~~---------------------------------~~~~ 46 (282)
T cd06643 3 PEEFWEII-GELGDGAFGKVYKAQNKE--TGVLAAAKVIDTKS---------------------------------EEEL 46 (282)
T ss_pred HHHCEEEE-EEEECCCCEEEEEEEECC--CCCEEEEEEECCCC---------------------------------HHHH
T ss_conf 45887974-598027683999999889--99499999977248---------------------------------8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHH
Q ss_conf 988788865599998898720244677664300001022178--33530024786324267733200225---6899999
Q gi|254780623|r 196 EQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDL---ERLSVTL 270 (517)
Q Consensus 196 ~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l 270 (517)
T Consensus 47 -------~~~~~Ei~il~~l~H-----pn--Iv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi 112 (282)
T cd06643 47 -------EDYMVEIDILASCDH-----PN--IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQT 112 (282)
T ss_pred -------HHHHHHHHHHHHCCC-----CC--CCEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf -------999999999986799-----89--9929999998998999999379994899998707999999999999999
Q ss_pred HHHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 99999989744866178786228980289535743403121698
Q gi|254780623|r 271 VQSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 271 ~~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 113 ~~g-l~ylH~~~iiHRDIKp~NILl~~~g~vKl~DFGls~~~~~ 155 (282)
T cd06643 113 LEA-LNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 155 (282)
T ss_pred HHH-HHHHHHCCEEEEECCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf 999-9999978976633666877887999999960747730787