HHsearch alignment for GI: 254780623 and conserved domain: cd06645

>cd06645 STKc_MAP4K3 Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MA
Probab=98.74  E-value=2.7e-08  Score=83.45  Aligned_cols=143  Identities=17%  Similarity=0.271  Sum_probs=90.4

Q ss_pred             HHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9867--66677888865555021288872368764031046887777889998753211468543346917999999988
Q gi|254780623|r  121 CEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQV  198 (517)
Q Consensus       121 ~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  198 (517)
T Consensus         9 ~~y~~~~~iG~G~fg~Vy~~~~~~--t~~~~AvK~i~~~-----------------------~~----------~~~~--   51 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVN--TGELAAIKVIKLE-----------------------PG----------EDFA--   51 (267)
T ss_pred             HHEEEEEEEECCCCEEEEEEEECC--CCCEEEEEEEECC-----------------------CH----------HHHH--
T ss_conf             940972498328685999999889--9979999999477-----------------------42----------0299--


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHC--CCCEEEEECCCCCCCCHHHHHHHHC-CC---HHHHHHHHHH
Q ss_conf             7888655999988987202446776643000010221--7833530024786324267733200-22---5689999999
Q gi|254780623|r  199 TKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRT--ERDVITMEWIDGVKISDTEKLRACG-HD---LERLSVTLVQ  272 (517)
Q Consensus       199 l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~s--t~~VLvmE~i~G~~i~d~~~l~~~~-~d---~~~la~~l~~  272 (517)
T Consensus        52 -----~~~~Ei~~l~~l~H-----pnI--v~~~~~~~~~~~~~ivmEy~~~g~L~~~~~--~~~~~~e~~~~~~~~qi~~  117 (267)
T cd06645          52 -----VVQQEIIMMKDCKH-----SNI--VAYFGSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQ  117 (267)
T ss_pred             -----HHHHHHHHHHHCCC-----CCE--EEEEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHH
T ss_conf             -----99999999986899-----988--289999998998999997369991999998--7299999999999999999


Q ss_pred             HHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             9999897448661787862289802895357434031216989
Q gi|254780623|r  273 SFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       273 ~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       118 a-l~yLH~~~iiHRDlKp~NILl~~~g~vKl~DFGls~~~~~~  159 (267)
T cd06645         118 G-LYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT  159 (267)
T ss_pred             H-HHHHHHCCCEEEECCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf             9-99999779356005533279879998999138675464787