HHsearch alignment for GI: 254780623 and conserved domain: cd06650

>cd06650 PKc_MEK1 MEK1 (MAPKK1 or MKK1): Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase
Probab=98.83  E-value=4.5e-09  Score=89.48  Aligned_cols=142  Identities=21%  Similarity=0.317  Sum_probs=86.3

Q ss_pred             HHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             867--666778888655550212888723687640310468877778899987532114685433469179999999887
Q gi|254780623|r  122 EFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVT  199 (517)
Q Consensus       122 ~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l  199 (517)
T Consensus         6 dyeii~~IG~G~fG~Vy~a~~~~--tg~~vAiK~i~~~~~---------------------~------------~~~~~~   50 (333)
T cd06650           6 DFEKISELGAGNGGVVFKVSHKP--SGLIMARKLIHLEIK---------------------P------------AIRNQI   50 (333)
T ss_pred             CCEEEEEEECCCCEEEEEEEECC--CCCEEEEEEECHHHC---------------------H------------HHHHHH
T ss_conf             78880276038991999999889--995999999765428---------------------7------------899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHHHH----HHHHHHH
Q ss_conf             88865599998898720244677664300001022178--33530024786324267733200225689----9999999
Q gi|254780623|r  200 KMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLERL----SVTLVQS  273 (517)
Q Consensus       200 ~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~~l----a~~l~~~  273 (517)
T Consensus        51 ~------~Ei~il~~l~h-----pn--IV~~~~~~~~~~~~~ivmEy~~gg~L~~~l--~~~~~~~e~~~~~i~~qi~~g  115 (333)
T cd06650          51 I------RELQVLHECNS-----PY--IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKG  115 (333)
T ss_pred             H------HHHHHHHHCCC-----CC--CCCEEEEEEECCEEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHH
T ss_conf             9------99999986799-----99--991989999899999999838999789999--754999999999999999999


Q ss_pred             HHHHH-HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             99989-744866178786228980289535743403121698
Q gi|254780623|r  274 FLLHT-LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       274 ~~~qi-~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       116 L~-ylH~~~~IiHRDIKP~NILi~~~g~vKL~DFGla~~~~~  156 (333)
T cd06650         116 LT-YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (333)
T ss_pred             HH-HHHHHCCEEECCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf             99-998628872224663117998999899997888763554