HHsearch alignment for GI: 254780623 and conserved domain: cd07829
>cd07829 STKc_CDK_like The catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of
Probab=98.63 E-value=1.5e-07 Score=77.70 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 5 ~~iG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~--------------------------------~~~~~~~----- 45 (282)
T cd07829 5 EKLGEGTYGVVYKARDKK--TGEIVALKKIRLDNEE--------------------------------EGIPSTA----- 45 (282)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCC--------------------------------HHHHHHH-----
T ss_conf 995127691999999989--9979999998321140--------------------------------3668999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHHHHHHHHHHH
Q ss_conf 599998898720244677664300001022178--33530024786324267733200225---6899999999999897
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDL---ERLSVTLVQSFLLHTL 279 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l~~~~~~qi~ 279 (517)
T Consensus 46 -~rEi~il~~l~h-----~n--Iv~~~~~~~~~~~~~ivmE~~~~-dL~~~l~~~~~~l~~~~~~~~~~Qi~~al-~~LH 115 (282)
T cd07829 46 -LREISLLKELKH-----PN--IVKLLDVIYTENKLYLVFEYCEM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGL-AYCH 115 (282)
T ss_pred -HHHHHHHHHCCC-----CC--CCEEEEEEEECCEEEEEEECCHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHH
T ss_conf -999999997799-----99--99088898149989999957135-78999983489999999999999999999-9999
Q ss_pred HCCEECCCCCCCEEEEECCCCEEEEECCHHEECC
Q ss_conf 4486617878622898028953574340312169
Q gi|254780623|r 280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLS 313 (517)
Q Consensus 280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~ 313 (517)
T Consensus 116 ~~~IiHRDIKpeNILl~~~~~iKl~DFGla~~~~ 149 (282)
T cd07829 116 SHRILHRDLKPQNLLINRDGVLKLADFGLARAFG 149 (282)
T ss_pred HCCEEEEECCHHHEEECCCCCEEECCCCCCEECC
T ss_conf 8995663256676247799998986675533357