HHsearch alignment for GI: 254780623 and conserved domain: cd07832
>cd07832 STKc_CCRK The catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase subfamily. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the deve
Probab=98.55 E-value=6.8e-08 Score=80.36 Aligned_cols=140 Identities=21% Similarity=0.268 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 ~~iG~G~fg~V~~~~d~~--t~~~vAiK~i~~~~~~--------------------~------------~~~~~~~---- 47 (286)
T cd07832 6 GRIGEGAHGIVFKAKHLE--TGETVALKKIHLRRLE--------------------G------------GIPNAAL---- 47 (286)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHCC--------------------C------------HHHHHHH----
T ss_conf 286325084999999889--9989999998133448--------------------4------------7899999----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH------
Q ss_conf 59999889872024467766430000102217833530024786324267733200225689999999999989------
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT------ 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi------ 278 (517)
T Consensus 48 --~Ei~~l~~l~h----pnIi~~~~~~~-~~~~~~iVmE~~~~-~L~~~--l~~~~---~~~~~~~i~~~~~qil~aL~y 114 (286)
T cd07832 48 --REIKALQACQH----PNIVKLLDVFP-HGSGFVLVMEYMPS-DLSEV--LRDSE---RPLPEAQVKSYMRMLLKGLAH 114 (286)
T ss_pred --HHHHHHHHCCC----CCCCEEEEEEE-ECCEEEEEEECCCC-CHHHH--HHHCC---CCCCHHHHHHHHHHHHHHHHH
T ss_conf --99999986799----99892999999-89999999848999-88999--98659---998999999999999999999
Q ss_pred -HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf -7448661787862289802895357434031216989
Q gi|254780623|r 279 -LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 279 -~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 115 LH~~~IiHrDiKPeNIll~~~~~vKL~DFG~a~~~~~~ 152 (286)
T cd07832 115 MHALGIMHRDLKPANLLISADGVLKIADFGLARLLSEE 152 (286)
T ss_pred HHHCCEEECCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf 99899577758768779869998898016645135788