HHsearch alignment for GI: 254780623 and conserved domain: cd07837
>cd07837 STKc_CdkB_plant The catalytic domain of the Serine/Threonine Kinase, Plant Cyclin-Dependent protein Kinase CdkB subfamily. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrat
Probab=98.54 E-value=1.5e-07 Score=77.78 Aligned_cols=141 Identities=20% Similarity=0.283 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 7 ~~lG~G~fg~V~~a~~~~--t~~~vAiK~~~~~~~~~--------------------------------~~~~~~----- 47 (295)
T cd07837 7 EKIGEGTYGKVYKARDKN--TGKLVALKKTRLEMDEE--------------------------------GIPPTA----- 47 (295)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHHHH--------------------------------HHHHHH-----
T ss_conf 698326185999999999--99899999970352023--------------------------------448999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCH--HCCC-----CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 59999889872024467766430000102--2178-----3353002478632426773320022568999999999998
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWN--RTER-----DVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLH 277 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~--~st~-----~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~q 277 (517)
T Consensus 48 -~rEi~il~~l~~----~~~--i~~~~~~~~~~~~~~~~~~~iv~E~~~~~-l~~~~~~~~~-~~~~~l~e~~~~~~~~q 118 (295)
T cd07837 48 -LREISLLQMLSE----SIY--IVRLLDVEHVEEKNGKPSLYLVFEYLDSD-LKKFMDSNGR-GPGRPLPAKTIKSFMYQ 118 (295)
T ss_pred -HHHHHHHHHCCC----CCC--EEEEEEEEEECCCCCCEEEEEEEECCCCC-HHHHHHHHCC-CCCCCCCHHHHHHHHHH
T ss_conf -999999986147----997--89886457512678955899999548986-7999998354-57888899999999999
Q ss_pred H-------HHCCEECCCCCCCEEEEECC-CCEEEEECCHHEECC
Q ss_conf 9-------74486617878622898028-953574340312169
Q gi|254780623|r 278 T-------LRDGFFHADLHPGNLFVDSK-GYIVAVDMGITGRLS 313 (517)
Q Consensus 278 i-------~~~GfFHaDPHpGNi~v~~d-g~i~~lDfG~vg~l~ 313 (517)
T Consensus 119 l~~al~~lH~~~IiHRDlKPeNILi~~~~~~iKl~DFGls~~~~ 162 (295)
T cd07837 119 LLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHCCCEECCCCHHHEEECCCCCEEEEECCCCHHHCC
T ss_conf 99999999988866742776662462789879993257233214