HHsearch alignment for GI: 254780623 and conserved domain: cd07861
>cd07861 STKc_CDK1_euk The catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.63 E-value=4.7e-08 Score=81.59 Aligned_cols=139 Identities=20% Similarity=0.276 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 6 ~~lG~G~fg~V~~~~~~~--t~~~vAvK~i~~~~~~~----------------------------~----~~~~~~---- 47 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKK--TGQIVAMKKIRLESEEE----------------------------G----VPSTAI---- 47 (285)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEECCCCCH----------------------------H----HHHHHH----
T ss_conf 790128791999999889--99899999980012344----------------------------6----799999----
Q ss_pred HHHHHHHHHHHHCCCCCCCC-CCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH-----
Q ss_conf 59999889872024467766-430000102217833530024786324267733200225689999999999989-----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQG-FRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT----- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~-v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi----- 278 (517)
T Consensus 48 --~Ei~il~~l~H-----pnIv~~~~~~~~-~~~~~lV~Ey~~~~l~~~l~~~~~~----~~l~~~~i~~~~~ql~~aL~ 115 (285)
T cd07861 48 --REISLLKELQH-----PNIVCLQDVLMQ-ESRLYLVFEFLSMDLKKYLDSLPKG----QYMDSMLVKSYLYQILQGIL 115 (285)
T ss_pred --HHHHHHHHCCC-----CCEEEEEEEEEE-CCEEEEEEECCCCCHHHHHHHHCCC----CCCCHHHHHHHHHHHHHHHH
T ss_conf --99999987799-----998047245701-9979999972688779999874258----98999999999999999999
Q ss_pred --HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECC
Q ss_conf --74486617878622898028953574340312169
Q gi|254780623|r 279 --LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLS 313 (517)
Q Consensus 279 --~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~ 313 (517)
T Consensus 116 ylH~~~IiHRDiKP~NIlld~~~~vKl~DFG~a~~~~ 152 (285)
T cd07861 116 FCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred HHHHCCCEECCCCCHHEEECCCCCEEEEECCHHHHCC
T ss_conf 9997993647278211688899988980075277629