HHsearch alignment for GI: 254780623 and conserved domain: cd07869
>cd07869 STKc_PFTAIRE1 The catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D
Probab=98.55 E-value=2.7e-07 Score=75.65 Aligned_cols=134 Identities=19% Similarity=0.206 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 11 ~~iG~G~fg~V~~a~~~~--tg~~vAiK~i~~~~~------------------~----~---~~--------~~~----- 50 (303)
T cd07869 11 EKLGEGSYATVYKGKSKV--NGKLVALKVIRLQEE------------------E----G---TP--------FTA----- 50 (303)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHH------------------C----C---CH--------HHH-----
T ss_conf 188238794999999889--997999999834461------------------3----4---68--------899-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC--CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH----
Q ss_conf 59999889872024467766430000102217--833530024786324267733200225689999999999989----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE--RDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT---- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st--~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi---- 278 (517)
T Consensus 51 -~rEi~il~~l~H-----pnI--v~l~~~~~~~~~~~lv~Ey~~~~l~~~~~~-~~~~l~~~-----~~~~~~~qll~~l 116 (303)
T cd07869 51 -IREASLLKGLKH-----ANI--VLLHDIIHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPE-----NVKLFLFQLLRGL 116 (303)
T ss_pred -HHHHHHHHHCCC-----CCE--EEEEEEECCCCEEEEEEECCCCHHHHHHHH-CCCCCCHH-----HHHHHHHHHHHHH
T ss_conf -999999986799-----898--279888725985899996366138999996-56999999-----9999999999999
Q ss_pred ---HHCCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf ---7448661787862289802895357434031216
Q gi|254780623|r 279 ---LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRL 312 (517)
Q Consensus 279 ---~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l 312 (517)
T Consensus 117 ~ylH~~~IiHRDlKp~NILl~~~~~vKi~DFGla~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCCEEEECCHHHEEECCCCCEEEEECCCCCCC
T ss_conf 9998789168666756579889998999774652316