HHsearch alignment for GI: 254780623 and conserved domain: cd07870
>cd07870 STKc_PFTAIRE2 The catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal re
Probab=98.68 E-value=9.5e-08 Score=79.22 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 11 ~~lG~G~fg~V~~a~~~~--tg~~vAiK~i~~~~~~~---------------------------------~~~~~----- 50 (291)
T cd07870 11 EKLGEGSYATVYKGISRI--NGQLVALKVISMKTEEG---------------------------------VPFTA----- 50 (291)
T ss_pred EEEECCCCCEEEEEEECC--CCCEEEEEEEEHHHCCC---------------------------------CHHHH-----
T ss_conf 893137280999999889--99799999983200123---------------------------------07899-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC--CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH----
Q ss_conf 59999889872024467766430000102217--833530024786324267733200225689999999999989----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE--RDVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT---- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st--~~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi---- 278 (517)
T Consensus 51 -~rEi~il~~l~-----HpnIv--~l~~~~~~~~~~~lv~Ey~~~~l~~~~~-~~~~~l~~-----~~i~~~~~Qil~aL 116 (291)
T cd07870 51 -IREASLLKGLK-----HANIV--LLHDIIHTKETLTFVFEYMHTDLAQYMI-QHPGGLHP-----YNVRLFMFQLLRGL 116 (291)
T ss_pred -HHHHHHHHHCC-----CCCEE--EEEECCCCCCEEEEEEECCCCHHHHHHH-HCCCCCCH-----HHHHHHHHHHHHHH
T ss_conf -99999998679-----99987--7831015786589999735724589999-66799999-----99999999999999
Q ss_pred ---HHCCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf ---744866178786228980289535743403121
Q gi|254780623|r 279 ---LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 279 ---~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 117 ~ylH~~~IiHRDlKPeNILi~~~~~vKl~DFGla~~ 152 (291)
T cd07870 117 AYIHGQHILHRDLKPQNLLISYLGELKLADFGLARA 152 (291)
T ss_pred HHHHHCCCEECCCCHHHEEECCCCCEEEEEECCCCC
T ss_conf 999878834144871325787899889987524302