HHsearch alignment for GI: 254780623 and conserved domain: cd07873
>cd07873 STKc_PCTAIRE1 The catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and ma
Probab=98.62 E-value=7.4e-08 Score=80.04 Aligned_cols=133 Identities=20% Similarity=0.308 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 12 ~~iG~G~fg~V~~~~~~~--t~~~vAiK~i~~~~~---------------------~~------------~~~~~----- 51 (301)
T cd07873 12 DKLGEGTYATVYKGRSKL--TDNLVALKEIRLEHE---------------------EG------------APCTA----- 51 (301)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEEEHHHC---------------------CC------------HHHHH-----
T ss_conf 387237692999999889--998999999854332---------------------31------------38899-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC--CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH----
Q ss_conf 599998898720244677664300001022178--33530024786324267733200225689999999999989----
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER--DVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHT---- 278 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~--~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi---- 278 (517)
T Consensus 52 -~~Ei~il~~l~H-----pnI--v~l~~~~~~~~~~~lV~Ey~~~~-L~~--~l~~~~~---~~~~~~i~~~~~Qll~al 117 (301)
T cd07873 52 -IREVSLLKDLKH-----ANI--VTLHDIIHTEKSLTLVFEYLDKD-LKQ--YLDDCGN---SINMHNVKLFLFQLLRGL 117 (301)
T ss_pred -HHHHHHHHHCCC-----CCC--CEEEEEEEECCEEEEEEECCCHH-HHH--HHHHCCC---CCCHHHHHHHHHHHHHHH
T ss_conf -999999987799-----997--64989994499789999636666-999--9997289---899999999999999999
Q ss_pred ---HHCCEECCCCCCCEEEEECCCCEEEEECCHHEE
Q ss_conf ---744866178786228980289535743403121
Q gi|254780623|r 279 ---LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGR 311 (517)
Q Consensus 279 ---~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~ 311 (517)
T Consensus 118 ~ylH~~gIiHRDiKPeNILl~~~~~iKl~DFGla~~ 153 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINERGELKLADFGLARA 153 (301)
T ss_pred HHHHHCCCEECCCCHHHEEECCCCCEEEEECCCCHH
T ss_conf 999978907642761335888999889997275031