HHsearch alignment for GI: 254780623 and conserved domain: cd07876

>cd07876 STKc_JNK2 The catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes
Probab=98.69  E-value=3.4e-08  Score=82.70  Aligned_cols=151  Identities=19%  Similarity=0.219  Sum_probs=84.7

Q ss_pred             HHHHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             999867--666778888655550212888723687640310468877778899987532114685433469179999999
Q gi|254780623|r  119 LYCEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALE  196 (517)
Q Consensus       119 ~F~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~  196 (517)
T Consensus        19 vl~rY~i~~~IG~G~fG~V~~a~d~~--tg~~VAIK~i~~~~~~--------------------------------~~~~   64 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTV--LGINVAVKKLSRPFQN--------------------------------QTHA   64 (359)
T ss_pred             HHHCEEEEEEEECCCCEEEEEEEECC--CCCEEEEEEECCHHCC--------------------------------HHHH
T ss_conf             13363881597215086999999889--9989999998910149--------------------------------7999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHH---HHHHHHHH
Q ss_conf             887888655999988987202-44677664300001022178335300247863242677332002256---89999999
Q gi|254780623|r  197 QVTKMEMDLRLEAAAFSEMAE-NTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDLE---RLSVTLVQ  272 (517)
Q Consensus       197 ~~l~~ElD~~~Ea~n~~~~~~-~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~---~la~~l~~  272 (517)
T Consensus        65 ~~~~------rEi~il~~l~HpnIv~l~~~f~~~~~~~~~~~~ylvmE~~~~~-L~~~i---~~~l~~~~~~~i~~qil~  134 (359)
T cd07876          65 KRAY------RELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVI---HMELDHERMSYLLYQMLC  134 (359)
T ss_pred             HHHH------HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCC-HHHHH---HCCCCHHHHHHHHHHHHH
T ss_conf             9999------9999998679969882899994167421266079999607998-89998---526999999999999999


Q ss_pred             HHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf             999989744866178786228980289535743403121698
Q gi|254780623|r  273 SFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK  314 (517)
Q Consensus       273 ~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~  314 (517)
T Consensus       135 g-L~ylH~~gIiHRDIKP~NILl~~~g~iKL~DFGlAr~~~~  175 (359)
T cd07876         135 G-IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT  175 (359)
T ss_pred             H-HHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCCCCCC
T ss_conf             9-9999868923057866876987899776235340301367