HHsearch alignment for GI: 254780623 and conserved domain: cd07879
>cd07879 STKc_p38delta_MAPK13 The catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MA
Probab=98.54 E-value=1.6e-07 Score=77.56 Aligned_cols=142 Identities=17% Similarity=0.240 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66677888865555021288872368764031046887777889998753211468543346917999999988788865
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMD 204 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 204 (517)
T Consensus 21 ~~IG~G~fG~Vy~a~d~--~tg~~vAiK~i~~~~~~~~--------------------------------~~~~~----- 61 (342)
T cd07879 21 KQVGSGAYGSVCSAIDK--RTGEKVAIKKLSRPFQSEI--------------------------------FAKRA----- 61 (342)
T ss_pred EEEECCCCEEEEEEEEC--CCCCEEEEEEECHHHCCHH--------------------------------HHHHH-----
T ss_conf 79722718499999988--9998999999871122779--------------------------------99999-----
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHCCC-----HHCCCCEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHHHHHHHH
Q ss_conf 5999988987202446776643000010-----2217833530024786324267733200225---6899999999999
Q gi|254780623|r 205 LRLEAAAFSEMAENTVKDQGFRVPKIDW-----NRTERDVITMEWIDGVKISDTEKLRACGHDL---ERLSVTLVQSFLL 276 (517)
Q Consensus 205 ~~~Ea~n~~~~~~~~~~~~~v~vP~vy~-----~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l~~~~~~ 276 (517)
T Consensus 62 -~rEi~il~~l~H----pnIv~l~~~~~~~~~~~~~~~~yiv~e~~~~----~l~~~~~~~l~e~~i~~i~~qil~a-L~ 131 (342)
T cd07879 62 -YRELTLLKHMQH----ENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT----DLQKIMGHPLSEDKVQYLVYQMLCG-LK 131 (342)
T ss_pred -HHHHHHHHHCCC----CCEEEEEEEEECCCCCCCCCEEEEEECCCCC----CHHHHHCCCCCHHHHHHHHHHHHHH-HH
T ss_conf -999999997469----9830047888504656666469999677524----3999965999999999999999999-99
Q ss_pred HHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 897448661787862289802895357434031216989
Q gi|254780623|r 277 HTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 277 qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 132 ylH~~gIiHRDlKPeNILl~~~~~vKL~DFGlAr~~~~~ 170 (342)
T cd07879 132 YIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred HHHHCCCEECCCCHHHEEECCCCCEEEEECCCCCCCCCC
T ss_conf 998788455768668846867786699856577447876