HHsearch alignment for GI: 254780623 and conserved domain: cd07880
>cd07880 STKc_p38gamma_MAPK12 The catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MA
Probab=98.64 E-value=8e-08 Score=79.78 Aligned_cols=145 Identities=18% Similarity=0.240 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 666778888655550212888723687640310-4688777788999875321146854334691799999998878886
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPG-VRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM 203 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~-i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 203 (517)
T Consensus 21 ~~IG~G~fG~V~~a~d~~--t~~~vAiK~i~~~~~~~~---------------------------------~~~~~~--- 62 (343)
T cd07880 21 KQVGSGAYGTVCSALDRR--TGAKVAIKKLYRPFQSEL---------------------------------FAKRAY--- 62 (343)
T ss_pred EEEECCCCEEEEEEEECC--CCCEEEEEEECHHHCCHH---------------------------------HHHHHH---
T ss_conf 797216274999999889--998999999873443869---------------------------------999999---
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCCH---HHHHHHHHHHHHHHHH
Q ss_conf 559999889872024-467766430000102217833530024786324267733200225---6899999999999897
Q gi|254780623|r 204 DLRLEAAAFSEMAEN-TVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHDL---ERLSVTLVQSFLLHTL 279 (517)
Q Consensus 204 D~~~Ea~n~~~~~~~-~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~---~~la~~l~~~~~~qi~ 279 (517)
T Consensus 63 ---rEi~il~~l~h~nIv~l~~~f~~~~~~~~~~~~ylv~e~~-g~~L~~~~k--~~~l~e~~i~~i~~Qil~a-L~ylH 135 (343)
T cd07880 63 ---RELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK--HEKLSEDRIQFLVYQMLKG-LKYIH 135 (343)
T ss_pred ---HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECC-CCCHHHHHH--CCCCCHHHHHHHHHHHHHH-HHHHH
T ss_conf ---9999998668989561778983277545566079999468-867999986--4998999999999999999-99999
Q ss_pred HCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH
Q ss_conf 44866178786228980289535743403121698
Q gi|254780623|r 280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK 314 (517)
Q Consensus 280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~ 314 (517)
T Consensus 136 ~~gIiHRDLKPeNILl~~~~~vKl~DFGla~~~~~ 170 (343)
T cd07880 136 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred HCCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCC
T ss_conf 78964156743656886778579734567744511