HHsearch alignment for GI: 254780623 and conserved domain: smart00146

>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=94.94  E-value=0.014  Score=39.06  Aligned_cols=85  Identities=16%  Similarity=0.119  Sum_probs=49.0

Q ss_pred             CCCCHHCCCHHCCCCEEEEECCCCCC-CCHH--HHHHHHCCCHH---HHHHHHHHHHHH-HHHHCCEECCCCCCCEEEEE
Q ss_conf             64300001022178335300247863-2426--77332002256---899999999999-89744866178786228980
Q gi|254780623|r  224 GFRVPKIDWNRTERDVITMEWIDGVK-ISDT--EKLRACGHDLE---RLSVTLVQSFLL-HTLRDGFFHADLHPGNLFVD  296 (517)
Q Consensus       224 ~v~vP~vy~~~st~~VLvmE~i~G~~-i~d~--~~l~~~~~d~~---~la~~l~~~~~~-qi~~~GfFHaDPHpGNi~v~  296 (517)
T Consensus        39 ~~~~y~vip--ls~~~GliE~v~~~~sl~~il~~~~~~~~~~~~~~~~~r~~F~~S~A~~s~~~yilglgDRH~~Nili~  116 (202)
T smart00146       39 HLRPYKVIP--TGPKSGLIEVVPNSTTLHQILYDWFKKKFPDPEDYFEARKNFTRSCAGYSVITYILGLGDRHNDNIMLD  116 (202)
T ss_pred             EEEEEEEEE--CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             677447998--359960699818970099999999999883988999999999999999999999821688986637881


Q ss_pred             CCCCEEEEECCHHE
Q ss_conf             28953574340312
Q gi|254780623|r  297 SKGYIVAVDMGITG  310 (517)
Q Consensus       297 ~dg~i~~lDfG~vg  310 (517)
T Consensus       117 ~~G~v~HIDfg~~~  130 (202)
T smart00146      117 KTGHLFHIDFGFIL  130 (202)
T ss_pred             CCCCEEEHHHHHHH
T ss_conf             89988842456664