HHsearch alignment for GI: 254780624 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=98.15 E-value=1.4e-06 Score=62.57 Aligned_cols=80 Identities=23% Similarity=0.287 Sum_probs=67.0
Q ss_pred CEEEECCHHHHHHHHHHHHHCCCC-------------------------------C-------EEEEECCCCCCCCCCCC
Q ss_conf 779860233557777766413886-------------------------------3-------27872133222211110
Q gi|254780624|r 72 YRVLDVAGGTGDVAFRIAEASDNR-------------------------------S-------QIVVADINNEMLSVGRD 113 (265)
Q Consensus 72 ~~iLDiGcGTG~~~~~l~~~~~~~-------------------------------~-------~v~giD~s~~Ml~~a~~ 113 (265)
T Consensus 193 ~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~~~~~G~Did~r~i~~Ak~ 272 (381)
T COG0116 193 EPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKELPIIYGSDIDPRHIEGAKA 272 (381)
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
T ss_conf 83416887734799999973445687633220045543213888999999999986514766658987489899999999
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE--EEEEC
Q ss_conf 000011222222222223334575544674036--64201
Q gi|254780624|r 114 RAFKENLQDCITFIEANAETLPFEANSFDACTL--AFGIR 151 (265)
Q Consensus 114 r~~~~~~~~~i~~~~~da~~lp~~d~sfD~V~~--sf~l~ 151 (265)
T Consensus 273 NA~~AGv~d~I~f~~~d~~~l~~~~~~~gvvI~NPPYGeR 312 (381)
T COG0116 273 NARAAGVGDLIEFKQADATDLKEPLEEYGVVISNPPYGER 312 (381)
T ss_pred HHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCHHH
T ss_conf 8997698832899974432166876669989958983011