HHsearch alignment for GI: 254780624 and conserved domain: COG2518

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].

Probab=99.03  E-value=4e-10  Score=85.38  Aligned_cols=108  Identities=21%  Similarity=0.256  Sum_probs=84.0

Q ss_pred             HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99985206446799779860233557777766413886327872133222211110000011222222222223334575
Q gi|254780624|r   58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE  137 (265)
Q Consensus        58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~  137 (265)
T Consensus        62 A~m~~~L~~~~g--~~VLEIGtGsGY~aAvla~l~~---~V~siEr~~~L~~~A~~~L~~lg~~-nV~v~~gDG~~G~~~  135 (209)
T COG2518          62 ARMLQLLELKPG--DRVLEIGTGSGYQAAVLARLVG---RVVSIERIEELAEQARRNLETLGYE-NVTVRHGDGSKGWPE  135 (209)
T ss_pred             HHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHHC---EEEEEEECHHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCC
T ss_conf             999997489999--8688877783099999999748---4999997199999999999976987-349997885568877


Q ss_pred             CCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEE
Q ss_conf             5446740366420132134432012100048521177630
Q gi|254780624|r  138 ANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLE  177 (265)
Q Consensus       138 d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~d  177 (265)
T Consensus       136 ~aPyD~I~Vtaa---a~~vP~~L---l~QL~~gGrlv~Pv  169 (209)
T COG2518         136 EAPYDRIIVTAA---APEVPEAL---LDQLKPGGRLVIPV  169 (209)
T ss_pred             CCCCCEEEEEEC---CCCCCHHH---HHHCCCCCEEEEEE
T ss_conf             798478999503---57799899---98506598899998