HHsearch alignment for GI: 254780624 and conserved domain: COG3897

Probab=95.40  E-value=0.014  Score=36.83  Aligned_cols=107  Identities=23%  Similarity=0.223  Sum_probs=67.5

Q ss_pred             CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             44679977986023355777776641388632787213322221111000001122222222222333457554467403
Q gi|254780624|r   66 PRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEANSFDACT  145 (265)
Q Consensus        66 ~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d~sfD~V~  145 (265)
T Consensus        75 PetVrgkrVLd~gagsgLvaIAaa~aGA--~~v~a~d~~P~~~~ai~lNa~ang--v~i~~~~~d~~g---~~~~~Dl~L  147 (218)
T COG3897          75 PETVRGKRVLDLGAGSGLVAIAAARAGA--AEVVAADIDPWLEQAIRLNAAANG--VSILFTHADLIG---SPPAFDLLL  147 (218)
T ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHH--HHHHHCCCCHHHHHHHHCCHHHCC--CEEEEEECCCCC---CCCCEEEEE
T ss_conf             6310365324415666708899998503--788762788478888530622156--216774313368---986403898


Q ss_pred             EEEEECCCHHHHHHHCCCCHHCCCCCEEEE-EECCC
Q ss_conf             664201321344320121000485211776-30554
Q gi|254780624|r  146 LAFGIRNMPHITLVLQEIYRILKCGGRLLV-LEFSE  180 (265)
Q Consensus       146 ~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i-~df~~  180 (265)
T Consensus       148 agDlfy~~~~a~~l~~-~~~~l~~~g~~vlvgdp~R  182 (218)
T COG3897         148 AGDLFYNHTEADRLIP-WKDRLAEAGAAVLVGDPGR  182 (218)
T ss_pred             EECEECCCHHHHHHHH-HHHHHHHCCCEEEEECCCC
T ss_conf             5030028358898899-9999985797799728997