HHsearch alignment for GI: 254780624 and conserved domain: COG4262
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only].
Probab=97.27 E-value=0.00033 Score=47.25 Aligned_cols=107 Identities=21% Similarity=0.300 Sum_probs=74.0
Q ss_pred CCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC----CHHCCC--CCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 9779860233557777766413886327872133222211110----000011--22222222222333-4575544674
Q gi|254780624|r 71 DYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRD----RAFKEN--LQDCITFIEANAET-LPFEANSFDA 143 (265)
Q Consensus 71 ~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~----r~~~~~--~~~~i~~~~~da~~-lp~~d~sfD~ 143 (265)
T Consensus 290 a~~vLvlGGGDGLAlRellk-yP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~dDAf~wlr~a~~~fD~ 368 (508)
T COG4262 290 ARSVLVLGGGDGLALRELLK-YPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVNDDAFQWLRTAADMFDV 368 (508)
T ss_pred CCEEEEECCCCHHHHHHHHH-CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCE
T ss_conf 42699972875187999971-88855278974388999873002676660367766875699965478899741345557
Q ss_pred CEEEEEECCCHHHH----------HHHCCCCHHCCCCCEEEEEE---CCCCCC
Q ss_conf 03664201321344----------32012100048521177630---554455
Q gi|254780624|r 144 CTLAFGIRNMPHIT----------LVLQEIYRILKCGGRLLVLE---FSEVQG 183 (265)
Q Consensus 144 V~~sf~l~~~~d~~----------~~l~e~~RvLKpGG~~~i~d---f~~p~~ 183 (265)
T Consensus 369 vIVD-----l~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQags~y~tp~v 416 (508)
T COG4262 369 VIVD-----LPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQAGSPYFTPRV 416 (508)
T ss_pred EEEE-----CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCE
T ss_conf 9996-----89989951343210899999997337575499954887657730