HHsearch alignment for GI: 254780624 and conserved domain: COG5459

Probab=96.77  E-value=0.00058  Score=45.71  Aligned_cols=109  Identities=19%  Similarity=0.336  Sum_probs=62.1

Q ss_pred             CEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC--CCCCCCCCCCCCEEEEE
Q ss_conf             7798602335577777664138863278721332222111100000112222222222233--34575544674036642
Q gi|254780624|r   72 YRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAE--TLPFEANSFDACTLAFG  149 (265)
Q Consensus        72 ~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~--~lp~~d~sfD~V~~sf~  149 (265)
T Consensus       115 qsiLDvG~GPgtgl~A~n~i~Pdl~sa~ile~sp~lrkV~~t-l~~nv~t~~td~r~s~vt~dRl~lp~--ad~ytl~i~  191 (484)
T COG5459         115 QSILDVGAGPGTGLWALNDIWPDLKSAVILEASPALRKVGDT-LAENVSTEKTDWRASDVTEDRLSLPA--ADLYTLAIV  191 (484)
T ss_pred             CHHHCCCCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHCCCCCC--CCEEEHHHH
T ss_conf             102003778752123320337880221234048999999999-98604533477778865021047883--223633343


Q ss_pred             ECCC-HH-HHH----HHCCCCHHCCCCCEEEEEECCCCCC
Q ss_conf             0132-13-443----2012100048521177630554455
Q gi|254780624|r  150 IRNM-PH-ITL----VLQEIYRILKCGGRLLVLEFSEVQG  183 (265)
Q Consensus       150 l~~~-~d-~~~----~l~e~~RvLKpGG~~~i~df~~p~~  183 (265)
T Consensus       192 ~~eLl~d~~ek~i~~~ie~lw~l~~~gg~lVivErGtp~G  231 (484)
T COG5459         192 LDELLPDGNEKPIQVNIERLWNLLAPGGHLVIVERGTPAG  231 (484)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHH
T ss_conf             5444435574318899999998606897499971798236