HHsearch alignment for GI: 254780624 and conserved domain: KOG3178
>KOG3178 consensus.
Probab=98.99 E-value=5e-09 Score=78.32 Aligned_cols=169 Identities=17% Similarity=0.227 Sum_probs=109.8
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCC
Q ss_conf 57667614801799999985206446799779860233557777766413886327872133222211110000011222
Q gi|254780624|r 43 VMNDLMSLGLHRFWKEAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQD 122 (265)
Q Consensus 43 ~~N~~~S~G~~r~Wr~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~ 122 (265)
T Consensus 152 ~~~~sm~~-l~~~~~~~il~~~~Gf~-~v~~avDvGgGiG~v~k~ll~~fp---~ik~infdlp~v~~~a~~~~-----~ 221 (342)
T KOG3178 152 DFNGSMSF-LSTLVMKKILEVYTGFK-GVNVAVDVGGGIGRVLKNLLSKYP---HIKGINFDLPFVLAAAPYLA-----P 221 (342)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHHCC---CCCEEECCHHHHHHHHHHHC-----C
T ss_conf 99999888-87888886420102655-676688758747699999997588---77255147899985223206-----7
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCEEEEEECCCHH--HHHHHCCCCHHCCCCCEEEEEECCCCCCCHHHH-------HHHH
Q ss_conf 22222222333-4575544674036642013213--443201210004852117763055445510112-------3456
Q gi|254780624|r 123 CITFIEANAET-LPFEANSFDACTLAFGIRNMPH--ITLVLQEIYRILKCGGRLLVLEFSEVQGPVFKK-------IYDM 192 (265)
Q Consensus 123 ~i~~~~~da~~-lp~~d~sfD~V~~sf~l~~~~d--~~~~l~e~~RvLKpGG~~~i~df~~p~~~~~~~-------~~~~ 192 (265)
T Consensus 222 gV~~v~gdmfq~~P~~----daI~mkWiLhdwtDedcvkiLknC~~sL~~~GkIiv~E~V~p~e~~~dd~~s~v~~~~d~ 297 (342)
T KOG3178 222 GVEHVAGDMFQDTPKG----DAIWMKWILHDWTDEDCVKILKNCKKSLPPGGKIIVVENVTPEEDKFDDIDSSVTRDMDL 297 (342)
T ss_pred CCCEECCCCCCCCCCC----CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEHHHH
T ss_conf 8651236453458876----759987000568768899999999985899888999835688777766643210104678
Q ss_pred HHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 5311133210254288768657899999689989999999975995379998
Q gi|254780624|r 193 WSFKVIPQLGRFIAGDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSFTN 244 (265)
Q Consensus 193 y~~~iiP~~g~~~~~~~~~Y~yL~~Si~~f~~~~el~~~l~~aGF~~v~~~~ 244 (265)
T Consensus 298 lm~~-------~~~~Gke------------rt~~e~q~l~~~~gF~~~~~~~ 330 (342)
T KOG3178 298 LMLT-------QTSGGKE------------RTLKEFQALLPEEGFPVCMVAL 330 (342)
T ss_pred HHHH-------HHCCCEE------------CCHHHHHHCCHHHCCCEEEEEE
T ss_conf 9998-------7525601------------1499997114664683468973