HHsearch alignment for GI: 254780624 and conserved domain: PRK00121
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed.
Probab=99.01 E-value=1.5e-10 Score=88.07 Aligned_cols=98 Identities=18% Similarity=0.258 Sum_probs=83.2
Q ss_pred CEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC-C--CCCCCCCCCEEEE
Q ss_conf 779860233557777766413886327872133222211110000011222222222223334-5--7554467403664
Q gi|254780624|r 72 YRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETL-P--FEANSFDACTLAF 148 (265)
Q Consensus 72 ~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~l-p--~~d~sfD~V~~sf 148 (265)
T Consensus 56 p~~lEIGfG~G~~l~~~A~~~P-~~~fIGiE~~~~gv~~~~~~~~~~~l-~Ni~i~~~da~~~l~~~~~~~s~~~i~i~- 132 (229)
T PRK00121 56 PIHLEIGFGRGEFLVEMAKANP-DINFIGIEIHEPGVAKALKKIEEAGL-KNLRLLCGDAVEVLEHFLPDGSLDRIYLN- 132 (229)
T ss_pred CEEEEECCCCCHHHHHHHHHCC-CCCEEEEEEEHHHHHHHHHHHHHCCC-CCEEEEECCHHHHHHHHCCCCCCCEEEEC-
T ss_conf 4399961589699999998688-88689999616999999999998299-83898834789999971464541404671-
Q ss_pred EECCCHHH-------------HHHHCCCCHHCCCCCEEEEE
Q ss_conf 20132134-------------43201210004852117763
Q gi|254780624|r 149 GIRNMPHI-------------TLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 149 ~l~~~~d~-------------~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 133 ----FPDPWpKkrH~KRRli~~~fl~~~~~~Lk~~G~i~~~ 169 (229)
T PRK00121 133 ----FPDPWPKKRHHKRRLVQPEFLELYARVLKPGGEFHFA 169 (229)
T ss_pred ----CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf ----7999976320240128999999999857999889998