HHsearch alignment for GI: 254780624 and conserved domain: PRK00274

>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=97.98  E-value=6.9e-06  Score=58.12  Aligned_cols=78  Identities=23%  Similarity=0.399  Sum_probs=60.5

Q ss_pred             HCCCH----HHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf             14801----79999998520644679977986023355777776641388632787213322221111000001122222
Q gi|254780624|r   49 SLGLH----RFWKEAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCI  124 (265)
Q Consensus        49 S~G~~----r~Wr~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i  124 (265)
T Consensus        16 ~lGQnFL~d~~ii~kIv~~~~~~~~--d~VlEIGpG~G~LT~~Ll~~~---~~v~aiEiD~~l~~~L~~~-------~~~   83 (267)
T PRK00274         16 SLGQNFLIDENIIDKIVRAADLQPG--DRVLEIGPGLGALTEPLLERA---AKVTAIEIDRDLAPILRET-------DNL   83 (267)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCC--CEEEEECCCCCHHHHHHHHHC---CCEEEEECCHHHHHHHHHC-------CCE
T ss_conf             7782214898999999996089999--907996388888999999626---8058863688999998504-------786


Q ss_pred             CCCCCCCCCCCCCC
Q ss_conf             22222233345755
Q gi|254780624|r  125 TFIEANAETLPFEA  138 (265)
Q Consensus       125 ~~~~~da~~lp~~d  138 (265)
T Consensus        84 ~ii~~D~L~~~~~~   97 (267)
T PRK00274         84 TIIEGDALKVDLEE   97 (267)
T ss_pred             EEEECHHHHCCHHH
T ss_conf             99965066478677