HHsearch alignment for GI: 254780624 and conserved domain: PRK00517

Probab=99.31  E-value=3e-11  Score=92.66  Aligned_cols=154  Identities=19%  Similarity=0.271  Sum_probs=103.5

Q ss_pred             HHHC--CCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf             7614--80179999998520644679977986023355777776641388632787213322221111000001122222
Q gi|254780624|r   47 LMSL--GLHRFWKEAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCI  124 (265)
Q Consensus        47 ~~S~--G~~r~Wr~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i  124 (265)
T Consensus       138 gmAFGTG~H~T-T~lcl~~l~~~~~~~~~vLDvG~GSGILaIaA~klG-a-~~v~a~DiD~~Av~~a~eN~~lN~v~~~~  214 (298)
T PRK00517        138 GLAFGTGTHPT-TRLCLEWLEKLVLPGKTVLDVGCGSGILAIAAAKLG-A-KPVLAIDIDPQAVEAARENAELNGVDDRL  214 (298)
T ss_pred             CCCCCCCCCHH-HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHCCCCCCE
T ss_conf             43456777747-999999998435468868871577069999999749-9-84999989899999999999986998426


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEEECCCHH-HHHHHCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHH
Q ss_conf             2222223334575544674036642013213-443201210004852117763055445510112345653111332102
Q gi|254780624|r  125 TFIEANAETLPFEANSFDACTLAFGIRNMPH-ITLVLQEIYRILKCGGRLLVLEFSEVQGPVFKKIYDMWSFKVIPQLGR  203 (265)
Q Consensus       125 ~~~~~da~~lp~~d~sfD~V~~sf~l~~~~d-~~~~l~e~~RvLKpGG~~~i~df~~p~~~~~~~~~~~y~~~iiP~~g~  203 (265)
T Consensus       215 ~~~~~~~~~---~~~~~DlvvANI-l---a~vl~~l~~~~~~~l~~~G~lilS-----------GI--------------  262 (298)
T PRK00517        215 ELYLPEDQP---LEGKADVIVANI-L---ANPLIELAPDLAALVKPGGRLILS-----------GI--------------  262 (298)
T ss_pred             EEECCCCCC---CCCCCCEEEEEC-C---HHHHHHHHHHHHHHHCCCCEEEEE-----------CC--------------
T ss_conf             896166434---467646899731-5---899999999999973899799992-----------78--------------


Q ss_pred             HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEE
Q ss_conf             54288768657899999689989999999975995379998556649999
Q gi|254780624|r  204 FIAGDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSFTNYTNGVVALH  253 (265)
Q Consensus       204 ~~~~~~~~Y~yL~~Si~~f~~~~el~~~l~~aGF~~v~~~~~~~Gi~~i~  253 (265)
T Consensus       263 -l~--~--------------~~~~v~~~~~~~g~~~~~~~-~~~~W~~l~  294 (298)
T PRK00517        263 -LA--E--------------QADEVLEAYEDAGFTLDEVA-EREEWVRIV  294 (298)
T ss_pred             -CH--H--------------HHHHHHHHHHHCCCEEEEEE-EECCEEEEE
T ss_conf             -48--8--------------99999999998799897886-039889999