HHsearch alignment for GI: 254780624 and conserved domain: PRK00536

Probab=97.39  E-value=0.00017  Score=49.07  Aligned_cols=106  Identities=14%  Similarity=0.134  Sum_probs=69.5

Q ss_pred             HHHHHHC-CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHC---CCCCCCCCCCCCCCCCC
Q ss_conf             9985206-4467997798602335577777664138863278721332222111100000---11222222222223334
Q gi|254780624|r   59 AMVTNLN-PRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFK---ENLQDCITFIEANAETL  134 (265)
Q Consensus        59 ~~i~~l~-~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~---~~~~~~i~~~~~da~~l  134 (265)
T Consensus        60 EMl~Hvpl~~Hp~Pk~VLIIGGGDGG~~REvlKH-~--~~v~~VEID~~Vv~~sk~ylP~~~~~~~dpr~~~~~~---~~  133 (262)
T PRK00536         60 ELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKY-D--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LL  133 (262)
T ss_pred             HHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHCC-C--CEEEEEEECHHHHHHHHHHCHHHHHHHCCCCEEHHHH---HH
T ss_conf             8875302321899787999868755999998728-9--7669999678999999997856565413996113999---87


Q ss_pred             CCCCCCCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEE
Q ss_conf             57554467403664201321344320121000485211776
Q gi|254780624|r  135 PFEANSFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLV  175 (265)
Q Consensus       135 p~~d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i  175 (265)
T Consensus       134 ~~~~~~fDvIIvD-s----l~~~~~~~~l~~~L~~~Gi~v~  169 (262)
T PRK00536        134 DLDIKKYDLIICL-Q----EPDIHKIDGLKRMLKEDGVFIS  169 (262)
T ss_pred             HHCCCCCCEEEEC-C----CCCCCHHHHHHHHHCCCCEEEE
T ss_conf             6154766889988-9----9980549999998589989998