HHsearch alignment for GI: 254780624 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=98.29 E-value=7.5e-07 Score=64.30 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=77.5
Q ss_pred CCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHC--CC--CCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 67997798602335577777664138863278721332222111100000--11--22222222222333-457554467
Q gi|254780624|r 68 KSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFK--EN--LQDCITFIEANAET-LPFEANSFD 142 (265)
Q Consensus 68 ~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~--~~--~~~~i~~~~~da~~-lp~~d~sfD 142 (265)
T Consensus 76 h~~pk~VLIiGGGDGg~~rE~lkh-~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~~~yD 154 (283)
T PRK00811 76 HPNPKKVLIIGGGDGGTLREVLKH-PSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETENSFD 154 (283)
T ss_pred CCCCCEEEEECCCCHHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCC
T ss_conf 899774899568747999998427-8856799994689999999998388631330297159982789999984523554
Q ss_pred CCEEEEEECCCHHH---------HHHHCCCCHHCCCCCEEEEE
Q ss_conf 40366420132134---------43201210004852117763
Q gi|254780624|r 143 ACTLAFGIRNMPHI---------TLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 143 ~V~~sf~l~~~~d~---------~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 155 vII~D-----~tDP~gpa~~Lft~~Fy~~~~~~L~~~Gi~v~Q 192 (283)
T PRK00811 155 VIIVD-----STDPVGPAEGLFTKEFYENCKRALKEGGIFVAQ 192 (283)
T ss_pred EEEEE-----CCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEC
T ss_conf 89980-----899886445534599999999853999589992