HHsearch alignment for GI: 254780624 and conserved domain: PRK03612
>PRK03612 spermidine synthase; Provisional.
Probab=98.30 E-value=7.4e-07 Score=64.36 Aligned_cols=114 Identities=22% Similarity=0.266 Sum_probs=80.2
Q ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC--HHCCC----CCCCCCCCCCCC
Q ss_conf 999852064467997798602335577777664138863278721332222111100--00011----222222222223
Q gi|254780624|r 58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDR--AFKEN----LQDCITFIEANA 131 (265)
Q Consensus 58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r--~~~~~----~~~~i~~~~~da 131 (265)
T Consensus 281 E~LvHp~m~~~~~p~~VLiiGGGdG~a~revLk~-~~ve~v~lVelD~~vv~lar~~~~l~~~n~~a~~DpRv~v~~~Da 359 (516)
T PRK03612 281 EALVHPALAASPRARRVLILGGGDGLALREVLKY-PDVEQVTLVDLDPAVTELARTSPALRALNGGALDDPRVTVVNDDA 359 (516)
T ss_pred HHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEHHH
T ss_conf 6340402156999773899837760879998648-996637899518899999985721444412323499648985378
Q ss_pred CC-CCCCCCCCCCCEEEEEECCCHHHH----------HHHCCCCHHCCCCCEEEEEE
Q ss_conf 33-457554467403664201321344----------32012100048521177630
Q gi|254780624|r 132 ET-LPFEANSFDACTLAFGIRNMPHIT----------LVLQEIYRILKCGGRLLVLE 177 (265)
Q Consensus 132 ~~-lp~~d~sfD~V~~sf~l~~~~d~~----------~~l~e~~RvLKpGG~~~i~d 177 (265)
T Consensus 360 ~~~l~~~~~~yDvIi~D-----~pdP~~~~~~~LYs~eFY~~~~~~L~~~G~~v~qs 411 (516)
T PRK03612 360 FNWLRKLPETFDAIIVD-----LPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 411 (516)
T ss_pred HHHHHHCCCCCCEEEEE-----CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 99998688878889981-----89979952246753999999998449995899936