HHsearch alignment for GI: 254780624 and conserved domain: PRK05031
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated.
Probab=98.39 E-value=2.8e-07 Score=67.08 Aligned_cols=70 Identities=16% Similarity=0.308 Sum_probs=56.1
Q ss_pred HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99985206446799779860233557777766413886327872133222211110000011222222222223334
Q gi|254780624|r 58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETL 134 (265)
Q Consensus 58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~l 134 (265)
T Consensus 198 ~~a~~~~~~~~~---~vlDLYcG~Gtfsl~LA~~~---~~V~gVE~~~~aV~~A~~NA~~N~i-~N~~fi~~~a~~~ 267 (363)
T PRK05031 198 EWALDATKGSKG---DLLELYCGNGNFTLALARNF---RRVLATEISKPSVAAAQYNIAANGI-DNVQIIRMSAEEF 267 (363)
T ss_pred HHHHHHHHCCCC---CEEEEECCCCHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHCCC-CCEEEEECCHHHH
T ss_conf 999997613898---28986058664269988626---8799995389999999999998699-8649996589999