HHsearch alignment for GI: 254780624 and conserved domain: PRK09489

Probab=99.12  E-value=8.9e-11  Score=89.61  Aligned_cols=112  Identities=21%  Similarity=0.404  Sum_probs=83.0

Q ss_pred             HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99985206446799779860233557777766413886327872133222211110000011222222222223334575
Q gi|254780624|r   58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE  137 (265)
Q Consensus        58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~  137 (265)
T Consensus       186 ~lLL~~l~~~~--~g~VLDlGCG~Gvi~~~la~~~-p~~~v~l~Dv~a~Al~~ar~nl~~N~l~~--~v~~sd~~~-~v-  258 (342)
T PRK09489        186 QLLLSTLTPHT--KGKVLDVGCGAGVLSAVLAQHS-PKIRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS-EI-  258 (342)
T ss_pred             HHHHHHCCCCC--CCCEEEECCCHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHHCCCC--EEEECCCCC-CC-
T ss_conf             99997378324--8847860678179999999869-99769999688999999999899809886--899756445-65-


Q ss_pred             CCCCCCCEEE--E--EECC-CHHHHHHHCCCCHHCCCCCEEEEE
Q ss_conf             5446740366--4--2013-213443201210004852117763
Q gi|254780624|r  138 ANSFDACTLA--F--GIRN-MPHITLVLQEIYRILKCGGRLLVL  176 (265)
Q Consensus       138 d~sfD~V~~s--f--~l~~-~~d~~~~l~e~~RvLKpGG~~~i~  176 (265)
T Consensus       259 ~~~fD~IvsNPPFH~G~~~~~~i~~~fi~~A~~~L~~gG~L~iV  302 (342)
T PRK09489        259 KGRFDMIISNPPFHDGIQTSLDAAQTLIRGAVRHLNSGGELRIV  302 (342)
T ss_pred             CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             56789899688521575265899999999999861249889999