HHsearch alignment for GI: 254780624 and conserved domain: PRK10083

Probab=96.58  E-value=0.0051  Score=39.60  Aligned_cols=109  Identities=15%  Similarity=0.200  Sum_probs=63.9

Q ss_pred             HHHHHHCCCCCCCCEEEECCHHH-HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99852064467997798602335-57777766413886327872133222211110000011222222222223334575
Q gi|254780624|r   59 AMVTNLNPRKSKDYRVLDVAGGT-GDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE  137 (265)
Q Consensus        59 ~~i~~l~~~~~~~~~iLDiGcGT-G~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~  137 (265)
T Consensus       151 ~~~~~~~~~~g~--~VlV~G~G~iGl~~~~~~~~~~ga~~Vi~~d~~~~rl~~A~~~----GAd~vi~~~~~~~~~~-~~  223 (339)
T PRK10083        151 NVTGRTGPTEQD--VALIYGAGPVGLTIVQVLKGVYGVKNVIVADRIDERLALAKES----GADWVINNAQESLAEA-LA  223 (339)
T ss_pred             HHHHHHCCCCCC--EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC----CCCEEECCCCCCHHHH-HH
T ss_conf             999861899998--8999587659999999999856997899937989999999971----9989984887669999-98


Q ss_pred             CCCCC--CCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEECCC
Q ss_conf             54467--40366420132134432012100048521177630554
Q gi|254780624|r  138 ANSFD--ACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLEFSE  180 (265)
Q Consensus       138 d~sfD--~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~df~~  180 (265)
T Consensus       224 ~~G~~~dvvid~------~g~~~~~~~a~~~~~~gG~iv~~G~~~  262 (339)
T PRK10083        224 EKGVKPTLIFDA------ACHPSILEEAVTLASPAARIVLMGFSS  262 (339)
T ss_pred             HCCCCCCEEEEC------CCCHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf             539996199966------668899999999851880999992589