HHsearch alignment for GI: 254780624 and conserved domain: TIGR00095

Probab=95.34  E-value=0.019  Score=35.93  Aligned_cols=118  Identities=17%  Similarity=0.242  Sum_probs=75.8

Q ss_pred             HHHHHH--HHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCC----CCCCCCCCCCC
Q ss_conf             999985--206446799779860233557777766413886327872133222211110000011----22222222222
Q gi|254780624|r   57 KEAMVT--NLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKEN----LQDCITFIEAN  130 (265)
Q Consensus        57 r~~~i~--~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~----~~~~i~~~~~d  130 (265)
T Consensus        41 REslFNiv~~~~~i~-~~~~LD~FAGsG~LG~EALSRgA--~~~~f~E~d~~~~~~l~~N~~~L~nrlk~~~~~~~~~~~  117 (210)
T TIGR00095        41 RESLFNIVILRPEIV-GAHFLDLFAGSGSLGLEALSRGA--KSAVFVEQDKKVAQTLKENLSTLKNRLKLSGEQATVLND  117 (210)
T ss_pred             HHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
T ss_conf             567876999987636-87278854064465376640141--623787368679999999999988871585300000002


Q ss_pred             C-CC---CCCCCC-CCCCCEE--EEEECC--CHHHH----HHHCCCCHHCCCCCEEEEEE
Q ss_conf             3-33---457554-4674036--642013--21344----32012100048521177630
Q gi|254780624|r  131 A-ET---LPFEAN-SFDACTL--AFGIRN--MPHIT----LVLQEIYRILKCGGRLLVLE  177 (265)
Q Consensus       131 a-~~---lp~~d~-sfD~V~~--sf~l~~--~~d~~----~~l~e~~RvLKpGG~~~i~d  177 (265)
T Consensus       118 ~~~~~~~~~~~~ts~~d~iylDPPf~~~~ad~~~~l~l~~~alerl~~~L~~~~~i~ve~  177 (210)
T TIGR00095       118 AERALLFLAKKQTSPFDIIYLDPPFNTGLADLEAILELLGEALERLNKWLNPKGLIVVEY  177 (210)
T ss_pred             HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             566657765179961147871488887610379999999999998731048785799863