HHsearch alignment for GI: 254780624 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.83 E-value=0.0035 Score=40.68 Aligned_cols=112 Identities=15% Similarity=0.161 Sum_probs=69.0
Q ss_pred HHHHHHCCCCCCCCEEEECCHHH-HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC--CC
Q ss_conf 99852064467997798602335-5777776641388632787213322221111000001122222222222333--45
Q gi|254780624|r 59 AMVTNLNPRKSKDYRVLDVAGGT-GDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAET--LP 135 (265)
Q Consensus 59 ~~i~~l~~~~~~~~~iLDiGcGT-G~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~--lp 135 (265)
T Consensus 167 ~~~~~~~~~~g--~~VlV~GaG~iGl~a~~~ak~~Ga-~~Vi~~d~~~~rl~~A~~l----Ga~~~i~~~~~~~~~~v~~ 239 (358)
T TIGR03451 167 AAVNTGGVKRG--DSVAVIGCGGVGDAAIAGAALAGA-SKIIAVDIDDRKLEWAREF----GATHTVNSSGTDPVEAIRA 239 (358)
T ss_pred HHHHHCCCCCC--CEEEEECCCHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHC----CCEEEECCCCCCHHHHHHH
T ss_conf 89864079999--889996737699999999998399-1899991988999999965----9909973998788999999
Q ss_pred CCCC-CCCCCEEEEEECCCHHHHHHHCCCCHHCCCCCEEEEEECCCCCC
Q ss_conf 7554-46740366420132134432012100048521177630554455
Q gi|254780624|r 136 FEAN-SFDACTLAFGIRNMPHITLVLQEIYRILKCGGRLLVLEFSEVQG 183 (265)
Q Consensus 136 ~~d~-sfD~V~~sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~df~~p~~ 183 (265)
T Consensus 240 ~t~g~G~Dvvie~------~G~~~~~~~al~~~~~gG~iv~~G~~~~~~ 282 (358)
T TIGR03451 240 LTGGFGADVVIDA------VGRPETYKQAFYARDLAGTVVLVGVPTPDM 282 (358)
T ss_pred HHCCCCCCEEEEC------CCCHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 8589887499999------999899999999762796999992258997